Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP4BP1P59074 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.21■□□□□ 0.67
CHMP4BP1P59074 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 ACTG1P4-201ENST00000425123 1122 ntBASIC19.21■□□□□ 0.67
CHMP4BP1P59074 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHMP4BP1P59074 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 AC068137.2-201ENST00000605408 478 ntBASIC19.2■□□□□ 0.66
CHMP4BP1P59074 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 PCDHB19P-201ENST00000570871 2371 ntBASIC19.2■□□□□ 0.66
CHMP4BP1P59074 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHMP4BP1P59074 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 TSEN15P1-201ENST00000423257 515 ntBASIC19.19■□□□□ 0.66
CHMP4BP1P59074 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP4BP1P59074 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms