Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AL023806.1-201ENST00000603994 1649 ntBASIC18.4■□□□□ 0.54
ATN1P54259 AC012317.2-201ENST00000623305 2251 ntBASIC18.4■□□□□ 0.54
ATN1P54259 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATN1P54259 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATN1P54259 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATN1P54259 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ATN1P54259 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ATN1P54259 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATN1P54259 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
ATN1P54259 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.39■□□□□ 0.54
ATN1P54259 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ATN1P54259 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ATN1P54259 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATN1P54259 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
ATN1P54259 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ATN1P54259 AL080243.2-201ENST00000418783 582 ntBASIC18.39■□□□□ 0.53
ATN1P54259 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.39■□□□□ 0.53
ATN1P54259 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ATN1P54259 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 AC093004.1-201ENST00000508850 424 ntBASIC18.39■□□□□ 0.53
ATN1P54259 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.39■□□□□ 0.53
ATN1P54259 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.39■□□□□ 0.53
ATN1P54259 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
ATN1P54259 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.39■□□□□ 0.53
ATN1P54259 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.39■□□□□ 0.53
ATN1P54259 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.39■□□□□ 0.53
ATN1P54259 AL512343.1-201ENST00000605837 169 ntBASIC18.39■□□□□ 0.53
ATN1P54259 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.39■□□□□ 0.53
ATN1P54259 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC18.39■□□□□ 0.53
ATN1P54259 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.39■□□□□ 0.53
ATN1P54259 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ATN1P54259 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.39■□□□□ 0.53
ATN1P54259 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ATN1P54259 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ATN1P54259 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.39■□□□□ 0.53
ATN1P54259 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.39■□□□□ 0.53
ATN1P54259 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ATN1P54259 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.39■□□□□ 0.53
ATN1P54259 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 BTBD7P1-201ENST00000447253 1453 ntBASIC18.39■□□□□ 0.53
ATN1P54259 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATN1P54259 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.39■□□□□ 0.53
ATN1P54259 REXO1L6P-201ENST00000603433 1515 ntBASIC18.39■□□□□ 0.53
ATN1P54259 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATN1P54259 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATN1P54259 EGFEM1P-202ENST00000431685 1563 ntBASIC18.38■□□□□ 0.53
ATN1P54259 AC104581.1-202ENST00000635932 2618 ntBASIC18.38■□□□□ 0.53
ATN1P54259 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATN1P54259 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATN1P54259 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ATN1P54259 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATN1P54259 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATN1P54259 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATN1P54259 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.38■□□□□ 0.53
ATN1P54259 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.38■□□□□ 0.53
ATN1P54259 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATN1P54259 FAM220BP-201ENST00000377689 816 ntBASIC18.38■□□□□ 0.53
ATN1P54259 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.38■□□□□ 0.53
ATN1P54259 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.38■□□□□ 0.53
ATN1P54259 RN7SL618P-201ENST00000477850 296 ntBASIC18.38■□□□□ 0.53
ATN1P54259 RNA5SP410-201ENST00000516285 106 ntBASIC18.38■□□□□ 0.53
ATN1P54259 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ATN1P54259 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.38■□□□□ 0.53
ATN1P54259 AC044860.1-202ENST00000559481 777 ntBASIC18.38■□□□□ 0.53
ATN1P54259 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.38■□□□□ 0.53
ATN1P54259 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.38■□□□□ 0.53
ATN1P54259 AP001542.1-201ENST00000591314 200 ntBASIC18.38■□□□□ 0.53
ATN1P54259 AL133215.2-201ENST00000609242 977 ntBASIC18.38■□□□□ 0.53
ATN1P54259 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATN1P54259 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.38■□□□□ 0.53
ATN1P54259 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATN1P54259 AC090164.3-201ENST00000610780 2143 ntBASIC18.38■□□□□ 0.53
ATN1P54259 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.38■□□□□ 0.53
ATN1P54259 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
ATN1P54259 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATN1P54259 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATN1P54259 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATN1P54259 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.38■□□□□ 0.53
ATN1P54259 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ATN1P54259 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATN1P54259 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATN1P54259 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ATN1P54259 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATN1P54259 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms