Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.21■□□□□ 0.033e-6■□□□□ 9
NCBP2P52298 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.21■□□□□ 0.033e-6■□□□□ 9
NCBP2P52298 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.09■□□□□ 0.013e-6■□□□□ 9
NCBP2P52298 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -03e-6■□□□□ 9
NCBP2P52298 NDRG2-271ENST00000557353 1919 ntTSL 215.04■□□□□ -03e-6■□□□□ 9
NCBP2P52298 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.91□□□□□ -0.023e-6■□□□□ 9
NCBP2P52298 RUFY2-209ENST00000472394 1113 ntTSL 514.87□□□□□ -0.033e-6■□□□□ 9
NCBP2P52298 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.041e-9■□□□□ 9
NCBP2P52298 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.8□□□□□ -0.043e-6■□□□□ 9
NCBP2P52298 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.043e-6■□□□□ 9
NCBP2P52298 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.063e-6■□□□□ 9
NCBP2P52298 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.69□□□□□ -0.063e-6■□□□□ 9
NCBP2P52298 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.063e-6■□□□□ 9
NCBP2P52298 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.063e-6■□□□□ 9
NCBP2P52298 SMIM1-202ENST00000452264 447 ntTSL 214.6□□□□□ -0.073e-6■□□□□ 9
NCBP2P52298 ZSCAN2-215ENST00000546275 460 ntTSL 414.55□□□□□ -0.083e-6■□□□□ 9
NCBP2P52298 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.49□□□□□ -0.093e-6■□□□□ 9
NCBP2P52298 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.29□□□□□ -0.123e-6■□□□□ 9
NCBP2P52298 AGAP3-221ENST00000490097 604 ntTSL 414.27□□□□□ -0.133e-6■□□□□ 9
NCBP2P52298 HIKESHI-205ENST00000531485 715 ntTSL 214.23□□□□□ -0.133e-6■□□□□ 9
NCBP2P52298 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.163e-6■□□□□ 9
NCBP2P52298 KIAA0100-210ENST00000580882 1582 ntTSL 1 (best)14.06□□□□□ -0.163e-6■□□□□ 9
NCBP2P52298 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.84□□□□□ -0.193e-6■□□□□ 9
NCBP2P52298 NDRG2-273ENST00000557616 579 ntTSL 513.73□□□□□ -0.213e-6■□□□□ 9
NCBP2P52298 DCXR-204ENST00000577712 429 ntTSL 513.72□□□□□ -0.213e-6■□□□□ 9
NCBP2P52298 RPS6KA3-202ENST00000438357 530 ntTSL 513.48□□□□□ -0.253e-6■□□□□ 9
NCBP2P52298 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.263e-6■□□□□ 9
NCBP2P52298 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.42□□□□□ -0.263e-6■□□□□ 9
NCBP2P52298 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.283e-6■□□□□ 9
NCBP2P52298 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.283e-6■□□□□ 9
NCBP2P52298 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.283e-6■□□□□ 9
NCBP2P52298 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.293e-6■□□□□ 9
NCBP2P52298 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.33e-6■□□□□ 9
NCBP2P52298 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.313e-6■□□□□ 9
NCBP2P52298 C8orf82-203ENST00000527462 401 ntAPPRIS ALT2 TSL 313.08□□□□□ -0.323e-6■□□□□ 9
NCBP2P52298 RBM6-217ENST00000483350 988 ntTSL 312.97□□□□□ -0.333e-6■□□□□ 9
NCBP2P52298 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.9□□□□□ -0.353e-6■□□□□ 9
NCBP2P52298 NDRG2-257ENST00000556688 583 ntTSL 512.73□□□□□ -0.373e-6■□□□□ 9
NCBP2P52298 ALAD-206ENST00000468504 851 ntTSL 512.5□□□□□ -0.413e-6■□□□□ 9
NCBP2P52298 NDRG2-232ENST00000554419 583 ntTSL 312.46□□□□□ -0.413e-6■□□□□ 9
NCBP2P52298 NDRG2-259ENST00000556924 603 ntTSL 412.44□□□□□ -0.423e-6■□□□□ 9
NCBP2P52298 NDRG2-260ENST00000556974 1012 ntTSL 512.41□□□□□ -0.423e-6■□□□□ 9
NCBP2P52298 NDRG2-265ENST00000557182 559 ntTSL 412.39□□□□□ -0.433e-6■□□□□ 9
NCBP2P52298 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.443e-6■□□□□ 9
NCBP2P52298 NDRG2-223ENST00000553867 848 ntTSL 512.26□□□□□ -0.453e-6■□□□□ 9
NCBP2P52298 NDRG2-231ENST00000554415 554 ntTSL 412.26□□□□□ -0.453e-6■□□□□ 9
NCBP2P52298 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.13□□□□□ -0.473e-6■□□□□ 9
NCBP2P52298 HIKESHI-206ENST00000532270 724 ntTSL 212.02□□□□□ -0.493e-6■□□□□ 9
NCBP2P52298 PLXNB1-203ENST00000449094 3863 ntTSL 211.85□□□□□ -0.513e-6■□□□□ 9
NCBP2P52298 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.543e-6■□□□□ 9
NCBP2P52298 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.573e-6■□□□□ 9
NCBP2P52298 ZSCAN2-206ENST00000442073 578 ntTSL 411.44□□□□□ -0.583e-6■□□□□ 9
NCBP2P52298 IP6K2-225ENST00000455545 539 ntTSL 311.24□□□□□ -0.613e-6■□□□□ 9
NCBP2P52298 ZSCAN2-204ENST00000358472 3231 ntTSL 2 BASIC11.21□□□□□ -0.623e-6■□□□□ 9
NCBP2P52298 ITSN1-211ENST00000399355 4003 ntTSL 1 (best) BASIC11.11□□□□□ -0.633e-6■□□□□ 9
NCBP2P52298 MTA1-219ENST00000551236 461 ntTSL 311.1□□□□□ -0.633e-6■□□□□ 9
NCBP2P52298 ZSCAN2-207ENST00000448803 3813 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.643e-6■□□□□ 9
NCBP2P52298 RASGRF2-201ENST00000265080 8167 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.653e-6■□□□□ 9
NCBP2P52298 GAB1-212ENST00000514639 728 ntTSL 310.97□□□□□ -0.653e-6■□□□□ 9
NCBP2P52298 RASGRF2-203ENST00000503795 3837 ntTSL 1 (best)10.97□□□□□ -0.653e-6■□□□□ 9
NCBP2P52298 ZNF572-201ENST00000319286 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.693e-6■□□□□ 9
NCBP2P52298 NDRG2-214ENST00000553442 639 ntTSL 510.56□□□□□ -0.723e-6■□□□□ 9
NCBP2P52298 NDRG2-210ENST00000397856 1309 ntTSL 5 BASIC10.44□□□□□ -0.743e-6■□□□□ 9
NCBP2P52298 NDRG2-248ENST00000555767 560 ntTSL 410.29□□□□□ -0.763e-6■□□□□ 9
NCBP2P52298 NDRG2-240ENST00000555026 1162 ntTSL 510.07□□□□□ -0.83e-6■□□□□ 9
NCBP2P52298 ALAD-208ENST00000482847 3247 ntTSL 29.99□□□□□ -0.813e-6■□□□□ 9
NCBP2P52298 RUFY2-213ENST00000602465 3863 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.843e-6■□□□□ 9
NCBP2P52298 MAPK1IP1L-204ENST00000556515 534 ntTSL 49.74□□□□□ -0.853e-6■□□□□ 9
NCBP2P52298 NDRG2-212ENST00000403829 1500 ntTSL 2 BASIC9.7□□□□□ -0.863e-6■□□□□ 9
NCBP2P52298 KIAA0100-202ENST00000528896 7407 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.93e-6■□□□□ 9
NCBP2P52298 NDRG2-250ENST00000556008 1051 ntTSL 59.05□□□□□ -0.963e-6■□□□□ 9
NCBP2P52298 MAPK1IP1L-205ENST00000622254 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.963e-6■□□□□ 9
NCBP2P52298 NDRG2-249ENST00000555869 871 ntTSL 59.01□□□□□ -0.973e-6■□□□□ 9
NCBP2P52298 NDRG2-255ENST00000556457 635 ntTSL 58.96□□□□□ -0.983e-6■□□□□ 9
NCBP2P52298 MAPK1IP1L-203ENST00000554364 565 ntTSL 28.28□□□□□ -1.083e-6■□□□□ 9
NCBP2P52298 NDRG2-234ENST00000554483 561 ntTSL 48.22□□□□□ -1.093e-6■□□□□ 9
NCBP2P52298 NDRG2-224ENST00000553900 576 ntTSL 27.79□□□□□ -1.163e-6■□□□□ 9
NCBP2P52298 NDRG2-275ENST00000557669 657 ntTSL 27.79□□□□□ -1.163e-6■□□□□ 9
NCBP2P52298 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.213e-6■□□□□ 9
NCBP2P52298 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.223e-6■□□□□ 9
NCBP2P52298 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.233e-6■□□□□ 9
NCBP2P52298 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.243e-6■□□□□ 9
NCBP2P52298 NDRG2-229ENST00000554379 553 ntTSL 46.77□□□□□ -1.333e-6■□□□□ 9
NCBP2P52298 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.373e-6■□□□□ 9
NCBP2P52298 RBM6-212ENST00000446471 695 ntTSL 46.47□□□□□ -1.373e-6■□□□□ 9
NCBP2P52298 CHD9-217ENST00000565832 2169 ntTSL 1 (best)5.87□□□□□ -1.473e-6■□□□□ 9
NCBP2P52298 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.63□□□□□ -1.833e-6■□□□□ 9
NCBP2P52298 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.923e-6■□□□□ 9
NCBP2P52298 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.043e-6■□□□□ 9
NCBP2P52298 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.5■■□□□ 1.195e-11■□□□□ 9
NCBP2P52298 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.015e-11■□□□□ 9
NCBP2P52298 VTA1-203ENST00000452973 3177 ntTSL 2 BASIC11.18□□□□□ -0.625e-11■□□□□ 9
NCBP2P52298 VTA1-205ENST00000620996 3272 ntTSL 3 BASIC9.44□□□□□ -0.95e-11■□□□□ 9
NCBP2P52298 VTA1-201ENST00000367621 1284 ntTSL 5 BASIC8.92□□□□□ -0.985e-11■□□□□ 9
NCBP2P52298 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.295e-11■□□□□ 9
NCBP2P52298 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.238e-10■□□□□ 9
NCBP2P52298 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.98□□□□□ -0.018e-10■□□□□ 9
NCBP2P52298 RPS9-209ENST00000448962 2384 ntTSL 214.55□□□□□ -0.088e-10■□□□□ 9
NCBP2P52298 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.4□□□□□ -0.18e-10■□□□□ 9
NCBP2P52298 RPS9-210ENST00000460761 644 ntTSL 213.29□□□□□ -0.288e-10■□□□□ 9
Retrieved 100 of 18,329 protein–RNA pairs in 331.9 ms