Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.7■□□□□ 0.42
TUBP50607 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.7■□□□□ 0.42
TUBP50607 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.7■□□□□ 0.42
TUBP50607 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
TUBP50607 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.7■□□□□ 0.42
TUBP50607 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.7■□□□□ 0.42
TUBP50607 AP001160.2-201ENST00000596071 487 ntBASIC17.7■□□□□ 0.42
TUBP50607 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 AL078644.1-201ENST00000609881 752 ntBASIC17.7■□□□□ 0.42
TUBP50607 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.7■□□□□ 0.42
TUBP50607 PCDHB19P-201ENST00000570871 2371 ntBASIC17.7■□□□□ 0.42
TUBP50607 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.7■□□□□ 0.42
TUBP50607 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.7■□□□□ 0.42
TUBP50607 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBP50607 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TUBP50607 AC103702.1-201ENST00000548801 2630 ntBASIC17.69■□□□□ 0.42
TUBP50607 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TUBP50607 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TUBP50607 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.69■□□□□ 0.42
TUBP50607 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.69■□□□□ 0.42
TUBP50607 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
TUBP50607 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.69■□□□□ 0.42
TUBP50607 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 AC092183.1-201ENST00000469884 875 ntBASIC17.69■□□□□ 0.42
TUBP50607 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.69■□□□□ 0.42
TUBP50607 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.69■□□□□ 0.42
TUBP50607 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.69■□□□□ 0.42
TUBP50607 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.69■□□□□ 0.42
TUBP50607 AL031432.2-201ENST00000566714 459 ntBASIC17.69■□□□□ 0.42
TUBP50607 AL928711.1-201ENST00000570165 459 ntBASIC17.69■□□□□ 0.42
TUBP50607 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 MIR4515-201ENST00000584082 81 ntBASIC17.69■□□□□ 0.42
TUBP50607 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.69■□□□□ 0.42
TUBP50607 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.69■□□□□ 0.42
TUBP50607 AC091812.2-201ENST00000619081 385 ntBASIC17.69■□□□□ 0.42
TUBP50607 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.69■□□□□ 0.42
TUBP50607 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.69■□□□□ 0.42
TUBP50607 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.69■□□□□ 0.42
TUBP50607 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TUBP50607 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.69■□□□□ 0.42
TUBP50607 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBP50607 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TUBP50607 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
TUBP50607 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TUBP50607 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 TOP3BP1-201ENST00000420768 1380 ntBASIC17.68■□□□□ 0.42
TUBP50607 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.68■□□□□ 0.42
TUBP50607 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TUBP50607 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.68■□□□□ 0.42
TUBP50607 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TUBP50607 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
TUBP50607 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.68■□□□□ 0.42
TUBP50607 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.68■□□□□ 0.42
TUBP50607 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.68■□□□□ 0.42
TUBP50607 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.68■□□□□ 0.42
TUBP50607 FAM58CP-201ENST00000435741 640 ntBASIC17.68■□□□□ 0.42
TUBP50607 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.68■□□□□ 0.42
TUBP50607 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.68■□□□□ 0.42
TUBP50607 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.68■□□□□ 0.42
TUBP50607 DUX4L17-201ENST00000557360 1267 ntBASIC17.68■□□□□ 0.42
TUBP50607 AP002472.1-201ENST00000577490 586 ntBASIC17.68■□□□□ 0.42
TUBP50607 AC091167.2-201ENST00000579581 588 ntBASIC17.68■□□□□ 0.42
TUBP50607 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.68■□□□□ 0.42
TUBP50607 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.68■□□□□ 0.42
TUBP50607 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
TUBP50607 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TUBP50607 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBP50607 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms