Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HTTP42858 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.55■□□□□ 0.56
HTTP42858 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HTTP42858 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HTTP42858 AC007969.1-201ENST00000433675 447 ntBASIC18.55■□□□□ 0.56
HTTP42858 RPL13AP20-201ENST00000459725 609 ntBASIC18.55■□□□□ 0.56
HTTP42858 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.55■□□□□ 0.56
HTTP42858 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.55■□□□□ 0.56
HTTP42858 AC061975.2-201ENST00000581722 295 ntBASIC18.55■□□□□ 0.56
HTTP42858 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.55■□□□□ 0.56
HTTP42858 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTTP42858 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HTTP42858 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTTP42858 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.55■□□□□ 0.56
HTTP42858 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.55■□□□□ 0.56
HTTP42858 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.55■□□□□ 0.56
HTTP42858 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HTTP42858 FAM86HP-204ENST00000513466 959 ntBASIC18.55■□□□□ 0.56
HTTP42858 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.55■□□□□ 0.56
HTTP42858 AP000812.2-201ENST00000538934 718 ntBASIC18.55■□□□□ 0.56
HTTP42858 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
HTTP42858 MIR4706-201ENST00000582134 82 ntBASIC18.55■□□□□ 0.56
HTTP42858 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.55■□□□□ 0.56
HTTP42858 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HTTP42858 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HTTP42858 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.55■□□□□ 0.56
HTTP42858 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HTTP42858 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HTTP42858 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.54■□□□□ 0.56
HTTP42858 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HTTP42858 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.54■□□□□ 0.56
HTTP42858 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HTTP42858 RNA5SP410-201ENST00000516285 106 ntBASIC18.54■□□□□ 0.56
HTTP42858 SLC25A47P1-201ENST00000531577 414 ntBASIC18.54■□□□□ 0.56
HTTP42858 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HTTP42858 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.54■□□□□ 0.56
HTTP42858 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HTTP42858 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.54■□□□□ 0.56
HTTP42858 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HTTP42858 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.54■□□□□ 0.56
HTTP42858 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.54■□□□□ 0.56
HTTP42858 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.54■□□□□ 0.56
HTTP42858 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HTTP42858 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.54■□□□□ 0.56
HTTP42858 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.54■□□□□ 0.56
HTTP42858 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HTTP42858 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HTTP42858 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HTTP42858 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HTTP42858 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HTTP42858 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HTTP42858 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HTTP42858 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
HTTP42858 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.54■□□□□ 0.56
HTTP42858 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HTTP42858 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.54■□□□□ 0.56
HTTP42858 AC021097.1-201ENST00000607902 574 ntBASIC18.54■□□□□ 0.56
HTTP42858 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HTTP42858 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HTTP42858 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HTTP42858 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.53■□□□□ 0.56
HTTP42858 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.53■□□□□ 0.56
HTTP42858 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.53■□□□□ 0.56
HTTP42858 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
HTTP42858 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HTTP42858 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HTTP42858 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.53■□□□□ 0.56
HTTP42858 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.53■□□□□ 0.56
HTTP42858 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HTTP42858 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
HTTP42858 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HTTP42858 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.53■□□□□ 0.56
HTTP42858 AC108860.2-201ENST00000562760 2183 ntBASIC18.53■□□□□ 0.56
HTTP42858 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HTTP42858 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HTTP42858 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HTTP42858 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.53■□□□□ 0.56
HTTP42858 AC006033.1-201ENST00000440505 426 ntBASIC18.53■□□□□ 0.56
HTTP42858 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.53■□□□□ 0.56
HTTP42858 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
HTTP42858 ACTG1P17-201ENST00000558391 1119 ntBASIC18.53■□□□□ 0.56
HTTP42858 MIR4722-201ENST00000578292 60 ntBASIC18.53■□□□□ 0.56
HTTP42858 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.53■□□□□ 0.56
HTTP42858 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HTTP42858 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HTTP42858 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HTTP42858 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.53■□□□□ 0.56
HTTP42858 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HTTP42858 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HTTP42858 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HTTP42858 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.52■□□□□ 0.56
HTTP42858 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HTTP42858 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HTTP42858 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.52■□□□□ 0.56
HTTP42858 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
HTTP42858 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HTTP42858 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.52■□□□□ 0.56
HTTP42858 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.52■□□□□ 0.56
HTTP42858 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
HTTP42858 EGFEM1P-202ENST00000431685 1563 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms