Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.71■□□□□ 0.75
TOP1P11387 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TOP1P11387 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP1P11387 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TOP1P11387 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP1P11387 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP1P11387 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
TOP1P11387 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.7■□□□□ 0.74
TOP1P11387 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP1P11387 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TOP1P11387 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
TOP1P11387 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TOP1P11387 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.7■□□□□ 0.74
TOP1P11387 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
TOP1P11387 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP1P11387 CEND1P1-201ENST00000451006 455 ntBASIC19.7■□□□□ 0.74
TOP1P11387 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP1P11387 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.7■□□□□ 0.74
TOP1P11387 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP1P11387 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.7■□□□□ 0.74
TOP1P11387 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
TOP1P11387 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TOP1P11387 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.7■□□□□ 0.74
TOP1P11387 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP1P11387 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP1P11387 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP1P11387 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.69■□□□□ 0.74
TOP1P11387 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TOP1P11387 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TOP1P11387 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.69■□□□□ 0.74
TOP1P11387 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.69■□□□□ 0.74
TOP1P11387 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.69■□□□□ 0.74
TOP1P11387 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TOP1P11387 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.69■□□□□ 0.74
TOP1P11387 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP1P11387 AC002056.1-201ENST00000395613 760 ntBASIC19.69■□□□□ 0.74
TOP1P11387 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.69■□□□□ 0.74
TOP1P11387 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.69■□□□□ 0.74
TOP1P11387 AP006288.1-201ENST00000446065 395 ntBASIC19.69■□□□□ 0.74
TOP1P11387 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
TOP1P11387 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP1P11387 AP001350.2-201ENST00000625104 1094 ntBASIC19.69■□□□□ 0.74
TOP1P11387 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TOP1P11387 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
TOP1P11387 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP1P11387 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP1P11387 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP1P11387 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP1P11387 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP1P11387 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TOP1P11387 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.69■□□□□ 0.74
TOP1P11387 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.69■□□□□ 0.74
TOP1P11387 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.69■□□□□ 0.74
TOP1P11387 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.69■□□□□ 0.74
TOP1P11387 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.69■□□□□ 0.74
TOP1P11387 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP1P11387 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.69■□□□□ 0.74
TOP1P11387 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TOP1P11387 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.68■□□□□ 0.74
TOP1P11387 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TOP1P11387 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TOP1P11387 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.68■□□□□ 0.74
TOP1P11387 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TOP1P11387 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.68■□□□□ 0.74
TOP1P11387 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.68■□□□□ 0.74
TOP1P11387 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
TOP1P11387 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP1P11387 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.68■□□□□ 0.74
TOP1P11387 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.68■□□□□ 0.74
TOP1P11387 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.68■□□□□ 0.74
TOP1P11387 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms