Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 BTBD7P1-201ENST00000447253 1453 ntBASIC18.82■□□□□ 0.6
HOXC6P09630 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC6P09630 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC6P09630 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC6P09630 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 HCG11-201ENST00000411553 5696 ntBASIC18.81■□□□□ 0.6
HOXC6P09630 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HOXC6P09630 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXC6P09630 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXC6P09630 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 AC098614.1-201ENST00000368528 745 ntBASIC18.81■□□□□ 0.6
HOXC6P09630 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXC6P09630 HLA-V-201ENST00000429037 534 ntBASIC18.81■□□□□ 0.6
HOXC6P09630 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.81■□□□□ 0.6
HOXC6P09630 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXC6P09630 AC105021.1-202ENST00000570572 669 ntBASIC18.81■□□□□ 0.6
HOXC6P09630 AC140912.1-201ENST00000577171 1054 ntBASIC18.81■□□□□ 0.6
HOXC6P09630 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXC6P09630 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC6P09630 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC6P09630 AC007541.1-201ENST00000570282 1469 ntBASIC18.81■□□□□ 0.6
HOXC6P09630 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOXC6P09630 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOXC6P09630 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC6P09630 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXC6P09630 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC6P09630 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXC6P09630 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC6P09630 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HOXC6P09630 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC6P09630 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC6P09630 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC6P09630 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC6P09630 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC6P09630 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC6P09630 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC6P09630 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HOXC6P09630 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HOXC6P09630 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC6P09630 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC6P09630 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC6P09630 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HOXC6P09630 AL080243.2-201ENST00000418783 582 ntBASIC18.8■□□□□ 0.6
HOXC6P09630 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.8■□□□□ 0.6
HOXC6P09630 ATP5G2P4-201ENST00000442175 420 ntBASIC18.8■□□□□ 0.6
HOXC6P09630 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC6P09630 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC6P09630 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
HOXC6P09630 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.8■□□□□ 0.6
HOXC6P09630 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC6P09630 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.8■□□□□ 0.6
HOXC6P09630 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.8■□□□□ 0.6
HOXC6P09630 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.8■□□□□ 0.6
HOXC6P09630 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.8■□□□□ 0.6
HOXC6P09630 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.8■□□□□ 0.6
HOXC6P09630 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC6P09630 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC6P09630 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC6P09630 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC6P09630 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC6P09630 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC6P09630 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HOXC6P09630 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HOXC6P09630 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC6P09630 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC6P09630 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC6P09630 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HOXC6P09630 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC6P09630 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC6P09630 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HOXC6P09630 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXC6P09630 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HOXC6P09630 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HOXC6P09630 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC6P09630 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC6P09630 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC6P09630 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXC6P09630 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXC6P09630 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXC6P09630 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXC6P09630 MTND6P24-201ENST00000440466 518 ntBASIC18.79■□□□□ 0.6
HOXC6P09630 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms