Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.11■□□□□ 0.81
CHGBP05060 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.11■□□□□ 0.81
CHGBP05060 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.11■□□□□ 0.81
CHGBP05060 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CHGBP05060 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.1■□□□□ 0.81
CHGBP05060 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
CHGBP05060 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHGBP05060 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CHGBP05060 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CHGBP05060 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.1■□□□□ 0.81
CHGBP05060 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHGBP05060 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHGBP05060 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHGBP05060 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHGBP05060 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CHGBP05060 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHGBP05060 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHGBP05060 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.1■□□□□ 0.81
CHGBP05060 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CHGBP05060 AC211486.1-202ENST00000416371 468 ntBASIC20.1■□□□□ 0.81
CHGBP05060 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHGBP05060 MKNK2P1-201ENST00000437526 628 ntBASIC20.1■□□□□ 0.81
CHGBP05060 DNAJB3-202ENST00000449667 1266 ntBASIC20.1■□□□□ 0.81
CHGBP05060 AC004967.1-201ENST00000453589 447 ntBASIC20.1■□□□□ 0.81
CHGBP05060 AC211476.1-201ENST00000503899 468 ntBASIC20.1■□□□□ 0.81
CHGBP05060 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.1■□□□□ 0.81
CHGBP05060 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.1■□□□□ 0.81
CHGBP05060 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.1■□□□□ 0.81
CHGBP05060 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.1■□□□□ 0.81
CHGBP05060 AL138918.1-201ENST00000568306 659 ntBASIC20.1■□□□□ 0.81
CHGBP05060 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
CHGBP05060 GPALPP1-207ENST00000611650 899 ntBASIC20.1■□□□□ 0.81
CHGBP05060 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.1■□□□□ 0.81
CHGBP05060 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CHGBP05060 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHGBP05060 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.1■□□□□ 0.81
CHGBP05060 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.1■□□□□ 0.81
CHGBP05060 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHGBP05060 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHGBP05060 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CHGBP05060 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHGBP05060 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHGBP05060 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHGBP05060 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.09■□□□□ 0.81
CHGBP05060 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.09■□□□□ 0.81
CHGBP05060 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHGBP05060 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHGBP05060 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHGBP05060 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.09■□□□□ 0.81
CHGBP05060 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.09■□□□□ 0.81
CHGBP05060 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.09■□□□□ 0.81
CHGBP05060 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CHGBP05060 AC243562.1-201ENST00000560672 389 ntBASIC20.09■□□□□ 0.81
CHGBP05060 AC093520.2-201ENST00000561830 333 ntBASIC20.09■□□□□ 0.81
CHGBP05060 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHGBP05060 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CHGBP05060 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.09■□□□□ 0.81
CHGBP05060 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.09■□□□□ 0.81
CHGBP05060 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.09■□□□□ 0.81
CHGBP05060 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CHGBP05060 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHGBP05060 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CHGBP05060 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHGBP05060 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CHGBP05060 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CHGBP05060 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CHGBP05060 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.08■□□□□ 0.81
CHGBP05060 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHGBP05060 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHGBP05060 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CHGBP05060 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHGBP05060 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHGBP05060 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CHGBP05060 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHGBP05060 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.08■□□□□ 0.81
CHGBP05060 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CHGBP05060 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.08■□□□□ 0.81
CHGBP05060 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHGBP05060 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHGBP05060 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.08■□□□□ 0.81
CHGBP05060 AL671277.1-201ENST00000429656 993 ntBASIC20.08■□□□□ 0.81
CHGBP05060 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.08■□□□□ 0.81
CHGBP05060 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.08■□□□□ 0.81
CHGBP05060 AC109635.5-201ENST00000533593 962 ntBASIC20.08■□□□□ 0.81
CHGBP05060 AC027612.4-201ENST00000605371 583 ntBASIC20.08■□□□□ 0.81
CHGBP05060 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.08■□□□□ 0.81
CHGBP05060 AC105339.1-204ENST00000636249 355 ntBASIC20.08■□□□□ 0.81
CHGBP05060 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHGBP05060 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHGBP05060 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHGBP05060 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHGBP05060 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CHGBP05060 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CHGBP05060 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.08■□□□□ 0.8
CHGBP05060 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHGBP05060 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHGBP05060 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.08■□□□□ 0.8
CHGBP05060 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.08■□□□□ 0.8
CHGBP05060 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHGBP05060 HTR7P1-202ENST00000624664 4411 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms