Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
ATP2A1O14983 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
ATP2A1O14983 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ATP2A1O14983 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 FO538757.1-201ENST00000623083 1397 ntBASIC19.15■□□□□ 0.66
ATP2A1O14983 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP2A1O14983 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP2A1O14983 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A1O14983 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP2A1O14983 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.14■□□□□ 0.66
ATP2A1O14983 AC006277.1-201ENST00000624348 1610 ntBASIC19.14■□□□□ 0.66
ATP2A1O14983 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP2A1O14983 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP2A1O14983 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.14■□□□□ 0.66
ATP2A1O14983 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.14■□□□□ 0.66
ATP2A1O14983 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP2A1O14983 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP2A1O14983 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP2A1O14983 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP2A1O14983 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ATP2A1O14983 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
ATP2A1O14983 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A1O14983 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP2A1O14983 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP2A1O14983 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ATP2A1O14983 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A1O14983 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.14■□□□□ 0.65
ATP2A1O14983 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.14■□□□□ 0.65
ATP2A1O14983 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A1O14983 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A1O14983 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.14■□□□□ 0.65
ATP2A1O14983 MIR6080-201ENST00000617359 66 ntBASIC19.14■□□□□ 0.65
ATP2A1O14983 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP2A1O14983 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
ATP2A1O14983 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ATP2A1O14983 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ATP2A1O14983 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP2A1O14983 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
ATP2A1O14983 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A1O14983 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A1O14983 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A1O14983 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
ATP2A1O14983 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A1O14983 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A1O14983 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A1O14983 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A1O14983 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A1O14983 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP2A1O14983 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ATP2A1O14983 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ATP2A1O14983 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.13■□□□□ 0.65
ATP2A1O14983 TREML5P-201ENST00000421694 576 ntBASIC19.13■□□□□ 0.65
ATP2A1O14983 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP2A1O14983 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.13■□□□□ 0.65
ATP2A1O14983 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.13■□□□□ 0.65
ATP2A1O14983 COX20P2-201ENST00000452636 358 ntBASIC19.13■□□□□ 0.65
ATP2A1O14983 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.13■□□□□ 0.65
ATP2A1O14983 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP2A1O14983 AC138761.1-201ENST00000584393 385 ntBASIC19.13■□□□□ 0.65
ATP2A1O14983 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.13■□□□□ 0.65
ATP2A1O14983 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP2A1O14983 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP2A1O14983 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ATP2A1O14983 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ATP2A1O14983 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP2A1O14983 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.13■□□□□ 0.65
ATP2A1O14983 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP2A1O14983 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
ATP2A1O14983 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
ATP2A1O14983 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ATP2A1O14983 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ATP2A1O14983 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ATP2A1O14983 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A1O14983 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A1O14983 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
ATP2A1O14983 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A1O14983 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms