Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SH2D4AQ9H788 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 AC108860.2-201ENST00000562760 2183 ntBASIC19.53■□□□□ 0.72
SH2D4AQ9H788 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 AC027307.2-201ENST00000591252 911 ntBASIC19.53■□□□□ 0.72
SH2D4AQ9H788 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 LINC02084-201ENST00000606069 1096 ntBASIC19.53■□□□□ 0.72
SH2D4AQ9H788 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 PP12613-201ENST00000424958 2230 ntBASIC19.53■□□□□ 0.72
SH2D4AQ9H788 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SH2D4AQ9H788 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 AP000842.3-202ENST00000569238 1080 ntBASIC19.52■□□□□ 0.72
SH2D4AQ9H788 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.52■□□□□ 0.72
SH2D4AQ9H788 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SH2D4AQ9H788 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SH2D4AQ9H788 AC012313.1-201ENST00000593393 3059 ntBASIC19.52■□□□□ 0.71
SH2D4AQ9H788 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SH2D4AQ9H788 TUBB3P1-201ENST00000405796 1332 ntBASIC19.51■□□□□ 0.71
SH2D4AQ9H788 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 KLF2P3-201ENST00000451977 1087 ntBASIC19.51■□□□□ 0.71
SH2D4AQ9H788 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 KRT18P34-201ENST00000488218 1270 ntBASIC19.51■□□□□ 0.71
SH2D4AQ9H788 SLC25A39P2-201ENST00000537614 270 ntBASIC19.51■□□□□ 0.71
SH2D4AQ9H788 AC026150.2-201ENST00000564693 1156 ntBASIC19.51■□□□□ 0.71
SH2D4AQ9H788 AC051619.7-201ENST00000568314 623 ntBASIC19.51■□□□□ 0.71
SH2D4AQ9H788 AL096865.1-201ENST00000606796 927 ntBASIC19.51■□□□□ 0.71
SH2D4AQ9H788 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.51■□□□□ 0.71
SH2D4AQ9H788 LINC00895-201ENST00000629028 1637 ntBASIC19.51■□□□□ 0.71
SH2D4AQ9H788 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms