Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 RNF165-205ENST00000588679 2904 ntBASIC16.59■□□□□ 0.25
CLDN23Q96B33 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN23Q96B33 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN23Q96B33 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN23Q96B33 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN23Q96B33 AC009113.1-201ENST00000570267 2443 ntBASIC16.58■□□□□ 0.25
CLDN23Q96B33 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
CLDN23Q96B33 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN23Q96B33 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN23Q96B33 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN23Q96B33 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN23Q96B33 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.58■□□□□ 0.24
CLDN23Q96B33 AC234783.1-201ENST00000441761 496 ntBASIC16.58■□□□□ 0.24
CLDN23Q96B33 KRT223P-202ENST00000449164 1292 ntBASIC16.58■□□□□ 0.24
CLDN23Q96B33 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN23Q96B33 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN23Q96B33 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 MIR4525-201ENST00000580000 75 ntBASIC16.58■□□□□ 0.24
CLDN23Q96B33 AC024267.1-201ENST00000582320 895 ntBASIC16.58■□□□□ 0.24
CLDN23Q96B33 AC013467.2-201ENST00000605472 835 ntBASIC16.58■□□□□ 0.24
CLDN23Q96B33 AC093726.1-201ENST00000608064 963 ntBASIC16.58■□□□□ 0.24
CLDN23Q96B33 AC133552.6-201ENST00000613406 534 ntBASIC16.58■□□□□ 0.24
CLDN23Q96B33 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 MIR6775-201ENST00000617557 69 ntBASIC16.58■□□□□ 0.24
CLDN23Q96B33 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN23Q96B33 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN23Q96B33 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN23Q96B33 BICD1-207ENST00000551848 1962 ntBASIC16.58■□□□□ 0.24
CLDN23Q96B33 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.58■□□□□ 0.24
CLDN23Q96B33 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN23Q96B33 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN23Q96B33 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN23Q96B33 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN23Q96B33 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN23Q96B33 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN23Q96B33 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN23Q96B33 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN23Q96B33 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN23Q96B33 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 REXO1L6P-201ENST00000603433 1515 ntBASIC16.57■□□□□ 0.24
CLDN23Q96B33 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN23Q96B33 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN23Q96B33 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN23Q96B33 AC098850.1-201ENST00000419919 790 ntBASIC16.57■□□□□ 0.24
CLDN23Q96B33 TMEM14DP-201ENST00000422205 345 ntBASIC16.57■□□□□ 0.24
CLDN23Q96B33 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 AC084346.2-201ENST00000607097 949 ntBASIC16.57■□□□□ 0.24
CLDN23Q96B33 AC026979.3-201ENST00000607315 403 ntBASIC16.57■□□□□ 0.24
CLDN23Q96B33 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLDN23Q96B33 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN23Q96B33 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN23Q96B33 AC098818.2-201ENST00000564925 2320 ntBASIC16.57■□□□□ 0.24
CLDN23Q96B33 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN23Q96B33 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN23Q96B33 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN23Q96B33 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN23Q96B33 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN23Q96B33 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLDN23Q96B33 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLDN23Q96B33 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN23Q96B33 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms