Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 AC092910.1-201ENST00000482027 1129 ntBASIC17.3■□□□□ 0.36
SCG3Q8WXD2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 AC105339.3-201ENST00000560043 636 ntBASIC17.3■□□□□ 0.36
SCG3Q8WXD2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 AC025062.2-201ENST00000605477 670 ntBASIC17.3■□□□□ 0.36
SCG3Q8WXD2 AC006538.3-201ENST00000612495 578 ntBASIC17.3■□□□□ 0.36
SCG3Q8WXD2 AL022326.1-202ENST00000641533 845 ntBASIC17.3■□□□□ 0.36
SCG3Q8WXD2 AC107918.4-202ENST00000641623 219 ntBASIC17.3■□□□□ 0.36
SCG3Q8WXD2 PMPCAP1-201ENST00000508114 1576 ntBASIC17.3■□□□□ 0.36
SCG3Q8WXD2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 AC132938.5-201ENST00000624980 1813 ntBASIC17.3■□□□□ 0.36
SCG3Q8WXD2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 AC079776.2-201ENST00000641154 1609 ntBASIC17.29■□□□□ 0.36
SCG3Q8WXD2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.29■□□□□ 0.36
SCG3Q8WXD2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 KRT18P13-201ENST00000400056 1290 ntBASIC17.29■□□□□ 0.36
SCG3Q8WXD2 MIR940-201ENST00000401276 94 ntBASIC17.29■□□□□ 0.36
SCG3Q8WXD2 KLF4P1-201ENST00000412782 1185 ntBASIC17.29■□□□□ 0.36
SCG3Q8WXD2 LAGE3P1-201ENST00000425356 484 ntBASIC17.29■□□□□ 0.36
SCG3Q8WXD2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 AL671883.3-201ENST00000603274 991 ntBASIC17.29■□□□□ 0.36
SCG3Q8WXD2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCG3Q8WXD2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 HYMAI-201ENST00000635591 3347 ntBASIC17.28■□□□□ 0.36
SCG3Q8WXD2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SCG3Q8WXD2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms