Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 IGHV3-65-201ENST00000523210 341 ntBASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 AL118508.1-201ENST00000613502 2345 ntBASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC116Q8IYX3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 AC116407.3-201ENST00000623905 1129 ntBASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 AC117500.6-201ENST00000624871 588 ntBASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC116Q8IYX3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 AC009078.2-202ENST00000463353 338 ntBASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 AC093909.1-201ENST00000504731 1122 ntBASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 AP001005.1-201ENST00000571755 1248 ntBASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 SLC25A6P4-201ENST00000586535 553 ntBASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 MIR7706-201ENST00000613747 67 ntBASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 AC004790.2-201ENST00000623588 572 ntBASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms