Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 SLC25A6P2-201ENST00000497974 877 ntBASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NHLRC1Q6VVB1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 AC002310.6-201ENST00000624451 1377 ntBASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 MRPL3P1-201ENST00000400109 1033 ntBASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 AC087163.2-201ENST00000457299 853 ntBASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 RPS15P9-201ENST00000494093 319 ntBASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 AC105339.3-201ENST00000560043 636 ntBASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 AC008667.4-201ENST00000607370 168 ntBASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 KRT8P49-201ENST00000604166 1432 ntBASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 AP002414.3-201ENST00000589352 1468 ntBASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.14■□□□□ 0.01
NHLRC1Q6VVB1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NHLRC1Q6VVB1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms