Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.92■□□□□ 0.62
EPHB4P54760 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.92■□□□□ 0.62
EPHB4P54760 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.92■□□□□ 0.62
EPHB4P54760 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.92■□□□□ 0.62
EPHB4P54760 GPS2P2-201ENST00000430745 888 ntBASIC18.92■□□□□ 0.62
EPHB4P54760 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHB4P54760 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHB4P54760 AC069335.1-201ENST00000489972 472 ntBASIC18.92■□□□□ 0.62
EPHB4P54760 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.92■□□□□ 0.62
EPHB4P54760 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.92■□□□□ 0.62
EPHB4P54760 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHB4P54760 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
EPHB4P54760 AC009336.1-201ENST00000608941 1553 ntBASIC18.92■□□□□ 0.62
EPHB4P54760 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 FO538757.1-201ENST00000623083 1397 ntBASIC18.92■□□□□ 0.62
EPHB4P54760 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHB4P54760 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
EPHB4P54760 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
EPHB4P54760 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.91■□□□□ 0.62
EPHB4P54760 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.91■□□□□ 0.62
EPHB4P54760 AL592309.1-201ENST00000443127 649 ntBASIC18.91■□□□□ 0.62
EPHB4P54760 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.91■□□□□ 0.62
EPHB4P54760 AL512356.2-201ENST00000546955 174 ntBASIC18.91■□□□□ 0.62
EPHB4P54760 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EPHB4P54760 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.91■□□□□ 0.62
EPHB4P54760 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.91■□□□□ 0.62
EPHB4P54760 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
EPHB4P54760 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
EPHB4P54760 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.91■□□□□ 0.62
EPHB4P54760 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.91■□□□□ 0.62
EPHB4P54760 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.91■□□□□ 0.62
EPHB4P54760 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.91■□□□□ 0.62
EPHB4P54760 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
EPHB4P54760 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHB4P54760 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
EPHB4P54760 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
EPHB4P54760 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.9■□□□□ 0.62
EPHB4P54760 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.9■□□□□ 0.62
EPHB4P54760 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHB4P54760 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHB4P54760 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
EPHB4P54760 HLA-V-201ENST00000429037 534 ntBASIC18.9■□□□□ 0.62
EPHB4P54760 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHB4P54760 KLF2P3-201ENST00000451977 1087 ntBASIC18.9■□□□□ 0.62
EPHB4P54760 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHB4P54760 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 AC079140.1-201ENST00000508039 487 ntBASIC18.9■□□□□ 0.62
EPHB4P54760 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.9■□□□□ 0.62
EPHB4P54760 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.9■□□□□ 0.62
EPHB4P54760 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHB4P54760 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHB4P54760 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.9■□□□□ 0.62
EPHB4P54760 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
EPHB4P54760 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EPHB4P54760 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
EPHB4P54760 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
EPHB4P54760 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
EPHB4P54760 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
EPHB4P54760 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHB4P54760 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHB4P54760 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHB4P54760 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHB4P54760 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms