Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CD58P19256 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CD58P19256 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.06■□□□□ 0.48
CD58P19256 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD58P19256 FLJ38576-201ENST00000623820 2459 ntBASIC18.06■□□□□ 0.48
CD58P19256 SLC22A20-204ENST00000530038 1673 ntBASIC18.06■□□□□ 0.48
CD58P19256 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.06■□□□□ 0.48
CD58P19256 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.06■□□□□ 0.48
CD58P19256 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD58P19256 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD58P19256 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD58P19256 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD58P19256 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD58P19256 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD58P19256 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD58P19256 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.05■□□□□ 0.48
CD58P19256 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.05■□□□□ 0.48
CD58P19256 KRT18P2-201ENST00000447938 1258 ntBASIC18.05■□□□□ 0.48
CD58P19256 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.05■□□□□ 0.48
CD58P19256 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.05■□□□□ 0.48
CD58P19256 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 MPDU1-223ENST00000582151 728 ntBASIC18.05■□□□□ 0.48
CD58P19256 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD58P19256 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD58P19256 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.05■□□□□ 0.48
CD58P19256 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD58P19256 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD58P19256 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CD58P19256 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CD58P19256 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CD58P19256 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD58P19256 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD58P19256 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.04■□□□□ 0.48
CD58P19256 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CD58P19256 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD58P19256 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD58P19256 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD58P19256 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.04■□□□□ 0.48
CD58P19256 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.04■□□□□ 0.48
CD58P19256 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.04■□□□□ 0.48
CD58P19256 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.04■□□□□ 0.48
CD58P19256 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.04■□□□□ 0.48
CD58P19256 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.04■□□□□ 0.48
CD58P19256 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.04■□□□□ 0.48
CD58P19256 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.04■□□□□ 0.48
CD58P19256 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD58P19256 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.04■□□□□ 0.48
CD58P19256 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.04■□□□□ 0.48
CD58P19256 AC027601.4-201ENST00000611259 610 ntBASIC18.04■□□□□ 0.48
CD58P19256 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.04■□□□□ 0.48
CD58P19256 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.04■□□□□ 0.48
CD58P19256 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD58P19256 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD58P19256 AL603756.1-201ENST00000606511 2163 ntBASIC18.04■□□□□ 0.48
CD58P19256 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD58P19256 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD58P19256 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD58P19256 AC092171.3-201ENST00000610122 2651 ntBASIC18.04■□□□□ 0.48
CD58P19256 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CD58P19256 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.03■□□□□ 0.48
CD58P19256 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD58P19256 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
CD58P19256 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.03■□□□□ 0.48
CD58P19256 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD58P19256 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.03■□□□□ 0.48
CD58P19256 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.03■□□□□ 0.48
CD58P19256 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD58P19256 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD58P19256 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD58P19256 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD58P19256 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CD58P19256 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.03■□□□□ 0.48
CD58P19256 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.03■□□□□ 0.48
CD58P19256 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CD58P19256 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD58P19256 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD58P19256 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD58P19256 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
CD58P19256 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD58P19256 AL513480.1-201ENST00000451731 511 ntBASIC18.03■□□□□ 0.48
CD58P19256 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.03■□□□□ 0.48
CD58P19256 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CD58P19256 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms