Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.02□□□□□ -0.17
CTSDP07339 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSDP07339 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSDP07339 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.02□□□□□ -0.17
CTSDP07339 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.02□□□□□ -0.17
CTSDP07339 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
CTSDP07339 AC005336.2-201ENST00000593183 939 ntBASIC14.02□□□□□ -0.17
CTSDP07339 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSDP07339 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CTSDP07339 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.02□□□□□ -0.17
CTSDP07339 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSDP07339 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CTSDP07339 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.02□□□□□ -0.17
CTSDP07339 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSDP07339 AC068418.2-201ENST00000577309 3703 ntBASIC14.02□□□□□ -0.17
CTSDP07339 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSDP07339 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CTSDP07339 AC126177.1-201ENST00000547829 2218 ntBASIC14.02□□□□□ -0.17
CTSDP07339 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSDP07339 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSDP07339 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CTSDP07339 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSDP07339 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSDP07339 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CTSDP07339 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CTSDP07339 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.01□□□□□ -0.17
CTSDP07339 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.01□□□□□ -0.17
CTSDP07339 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CTSDP07339 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.01□□□□□ -0.17
CTSDP07339 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CTSDP07339 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.01□□□□□ -0.17
CTSDP07339 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.01□□□□□ -0.17
CTSDP07339 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CTSDP07339 AC010203.1-204ENST00000548782 407 ntBASIC14.01□□□□□ -0.17
CTSDP07339 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CTSDP07339 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 AC013467.2-201ENST00000605472 835 ntBASIC14.01□□□□□ -0.17
CTSDP07339 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CTSDP07339 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CTSDP07339 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.01□□□□□ -0.17
CTSDP07339 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CTSDP07339 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CTSDP07339 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTSDP07339 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.01□□□□□ -0.17
CTSDP07339 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14□□□□□ -0.17
CTSDP07339 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14□□□□□ -0.17
CTSDP07339 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14□□□□□ -0.17
CTSDP07339 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CTSDP07339 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14□□□□□ -0.17
CTSDP07339 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14□□□□□ -0.17
CTSDP07339 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14□□□□□ -0.17
CTSDP07339 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 AC005521.1-201ENST00000393351 872 ntBASIC14□□□□□ -0.17
CTSDP07339 ACTG1P4-201ENST00000425123 1122 ntBASIC14□□□□□ -0.17
CTSDP07339 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14□□□□□ -0.17
CTSDP07339 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14□□□□□ -0.17
CTSDP07339 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14□□□□□ -0.17
CTSDP07339 RN7SL606P-201ENST00000472779 293 ntBASIC14□□□□□ -0.17
CTSDP07339 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CTSDP07339 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14□□□□□ -0.17
CTSDP07339 VENTXP5-201ENST00000523979 775 ntBASIC14□□□□□ -0.17
CTSDP07339 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14□□□□□ -0.17
CTSDP07339 AD001527.2-201ENST00000622994 785 ntBASIC14□□□□□ -0.17
CTSDP07339 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14□□□□□ -0.17
CTSDP07339 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
CTSDP07339 GGT3P-204ENST00000453783 1664 ntBASIC14□□□□□ -0.17
CTSDP07339 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CTSDP07339 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CTSDP07339 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms