Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 FAAHP1-202ENST00000446499 1238 ntBASIC18.7■□□□□ 0.58
CLSTN1O94985 FAM197Y8-203ENST00000450145 560 ntBASIC18.7■□□□□ 0.58
CLSTN1O94985 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.7■□□□□ 0.58
CLSTN1O94985 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.7■□□□□ 0.58
CLSTN1O94985 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.7■□□□□ 0.58
CLSTN1O94985 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLSTN1O94985 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.7■□□□□ 0.58
CLSTN1O94985 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.7■□□□□ 0.58
CLSTN1O94985 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.7■□□□□ 0.58
CLSTN1O94985 MTDHP4-201ENST00000600287 670 ntBASIC18.7■□□□□ 0.58
CLSTN1O94985 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CLSTN1O94985 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CLSTN1O94985 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.7■□□□□ 0.58
CLSTN1O94985 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.7■□□□□ 0.58
CLSTN1O94985 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLSTN1O94985 AL135999.2-201ENST00000622438 1686 ntBASIC18.69■□□□□ 0.58
CLSTN1O94985 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.69■□□□□ 0.58
CLSTN1O94985 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.69■□□□□ 0.58
CLSTN1O94985 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLSTN1O94985 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
CLSTN1O94985 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLSTN1O94985 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.69■□□□□ 0.58
CLSTN1O94985 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CLSTN1O94985 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.69■□□□□ 0.58
CLSTN1O94985 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.69■□□□□ 0.58
CLSTN1O94985 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.69■□□□□ 0.58
CLSTN1O94985 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.69■□□□□ 0.58
CLSTN1O94985 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLSTN1O94985 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.69■□□□□ 0.58
CLSTN1O94985 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.69■□□□□ 0.58
CLSTN1O94985 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.69■□□□□ 0.58
CLSTN1O94985 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.69■□□□□ 0.58
CLSTN1O94985 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLSTN1O94985 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.69■□□□□ 0.58
CLSTN1O94985 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.69■□□□□ 0.58
CLSTN1O94985 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLSTN1O94985 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLSTN1O94985 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.69■□□□□ 0.58
CLSTN1O94985 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CLSTN1O94985 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLSTN1O94985 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CLSTN1O94985 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.68■□□□□ 0.58
CLSTN1O94985 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CLSTN1O94985 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.68■□□□□ 0.58
CLSTN1O94985 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.68■□□□□ 0.58
CLSTN1O94985 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLSTN1O94985 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CLSTN1O94985 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLSTN1O94985 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.68■□□□□ 0.58
CLSTN1O94985 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.68■□□□□ 0.58
CLSTN1O94985 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.68■□□□□ 0.58
CLSTN1O94985 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.68■□□□□ 0.58
CLSTN1O94985 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.68■□□□□ 0.58
CLSTN1O94985 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.68■□□□□ 0.58
CLSTN1O94985 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.68■□□□□ 0.58
CLSTN1O94985 TP73-AS1-207ENST00000624167 988 ntBASIC18.68■□□□□ 0.58
CLSTN1O94985 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.68■□□□□ 0.58
CLSTN1O94985 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.68■□□□□ 0.58
CLSTN1O94985 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.68■□□□□ 0.58
CLSTN1O94985 AC079328.2-201ENST00000561241 3354 ntBASIC18.68■□□□□ 0.58
CLSTN1O94985 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CLSTN1O94985 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLSTN1O94985 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLSTN1O94985 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLSTN1O94985 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms