Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.6■□□□□ 0.57
LGR5O75473 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.6■□□□□ 0.57
LGR5O75473 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
LGR5O75473 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.6■□□□□ 0.57
LGR5O75473 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LGR5O75473 AL671710.1-201ENST00000610245 2349 ntBASIC18.6■□□□□ 0.57
LGR5O75473 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LGR5O75473 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
LGR5O75473 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.59■□□□□ 0.57
LGR5O75473 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.59■□□□□ 0.57
LGR5O75473 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LGR5O75473 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LGR5O75473 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LGR5O75473 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LGR5O75473 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.59■□□□□ 0.57
LGR5O75473 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.59■□□□□ 0.57
LGR5O75473 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.59■□□□□ 0.57
LGR5O75473 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 BASP1P1-201ENST00000430708 665 ntBASIC18.59■□□□□ 0.57
LGR5O75473 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.59■□□□□ 0.57
LGR5O75473 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.59■□□□□ 0.57
LGR5O75473 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.59■□□□□ 0.57
LGR5O75473 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 KRT18P34-201ENST00000488218 1270 ntBASIC18.59■□□□□ 0.57
LGR5O75473 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.59■□□□□ 0.57
LGR5O75473 AC190387.1-201ENST00000551683 408 ntBASIC18.59■□□□□ 0.57
LGR5O75473 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.59■□□□□ 0.57
LGR5O75473 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.59■□□□□ 0.57
LGR5O75473 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.59■□□□□ 0.57
LGR5O75473 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LGR5O75473 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LGR5O75473 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.59■□□□□ 0.57
LGR5O75473 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
LGR5O75473 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LGR5O75473 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
LGR5O75473 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.58■□□□□ 0.57
LGR5O75473 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LGR5O75473 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.58■□□□□ 0.57
LGR5O75473 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LGR5O75473 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.58■□□□□ 0.56
LGR5O75473 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.58■□□□□ 0.56
LGR5O75473 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.58■□□□□ 0.56
LGR5O75473 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.58■□□□□ 0.56
LGR5O75473 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LGR5O75473 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LGR5O75473 MIR943-201ENST00000401286 94 ntBASIC18.58■□□□□ 0.56
LGR5O75473 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.58■□□□□ 0.56
LGR5O75473 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.58■□□□□ 0.56
LGR5O75473 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.58■□□□□ 0.56
LGR5O75473 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LGR5O75473 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LGR5O75473 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
LGR5O75473 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LGR5O75473 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LGR5O75473 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
LGR5O75473 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LGR5O75473 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LGR5O75473 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LGR5O75473 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LGR5O75473 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.58■□□□□ 0.56
LGR5O75473 KRT8P39-201ENST00000396270 1433 ntBASIC18.57■□□□□ 0.56
LGR5O75473 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGR5O75473 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGR5O75473 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGR5O75473 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.57■□□□□ 0.56
LGR5O75473 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LGR5O75473 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.57■□□□□ 0.56
LGR5O75473 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LGR5O75473 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LGR5O75473 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LGR5O75473 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LGR5O75473 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LGR5O75473 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.57■□□□□ 0.56
LGR5O75473 AC142381.1-201ENST00000426099 345 ntBASIC18.57■□□□□ 0.56
LGR5O75473 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.57■□□□□ 0.56
LGR5O75473 KLF2P3-201ENST00000451977 1087 ntBASIC18.57■□□□□ 0.56
LGR5O75473 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.57■□□□□ 0.56
LGR5O75473 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.57■□□□□ 0.56
LGR5O75473 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.57■□□□□ 0.56
LGR5O75473 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.57■□□□□ 0.56
LGR5O75473 ALG1L8P-201ENST00000533887 760 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms