Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL021920.2-201ENST00000624828 1351 ntBASIC14.69□□□□□ -0.06
SHISA3A0PJX4 AC099063.4-201ENST00000641099 1602 ntBASIC14.69□□□□□ -0.06
SHISA3A0PJX4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.69□□□□□ -0.06
SHISA3A0PJX4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHISA3A0PJX4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHISA3A0PJX4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHISA3A0PJX4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.69□□□□□ -0.06
SHISA3A0PJX4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SHISA3A0PJX4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHISA3A0PJX4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHISA3A0PJX4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHISA3A0PJX4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 KRT8P49-201ENST00000604166 1432 ntBASIC14.68□□□□□ -0.06
SHISA3A0PJX4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 AC148477.5-201ENST00000625164 1645 ntBASIC14.68□□□□□ -0.06
SHISA3A0PJX4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 SPDYE13P-201ENST00000445314 798 ntBASIC14.68□□□□□ -0.06
SHISA3A0PJX4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.68□□□□□ -0.06
SHISA3A0PJX4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 AL512652.2-201ENST00000625156 1716 ntBASIC14.68□□□□□ -0.06
SHISA3A0PJX4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 LINC02447-202ENST00000501888 2146 ntBASIC14.68□□□□□ -0.06
SHISA3A0PJX4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.68□□□□□ -0.06
SHISA3A0PJX4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 AC073592.5-201ENST00000624854 528 ntBASIC14.67□□□□□ -0.06
SHISA3A0PJX4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 AC002310.6-201ENST00000624451 1377 ntBASIC14.67□□□□□ -0.06
SHISA3A0PJX4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHISA3A0PJX4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms