Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBX8Q9HC52 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.61
CBX8Q9HC52 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.83■□□□□ 0.61
CBX8Q9HC52 GGT4P-201ENST00000623672 1708 ntBASIC18.83■□□□□ 0.61
CBX8Q9HC52 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.83■□□□□ 0.61
CBX8Q9HC52 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.83■□□□□ 0.61
CBX8Q9HC52 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CBX8Q9HC52 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CBX8Q9HC52 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.83■□□□□ 0.61
CBX8Q9HC52 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CBX8Q9HC52 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CBX8Q9HC52 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX8Q9HC52 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX8Q9HC52 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX8Q9HC52 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.83■□□□□ 0.6
CBX8Q9HC52 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.83■□□□□ 0.6
CBX8Q9HC52 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.83■□□□□ 0.6
CBX8Q9HC52 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.83■□□□□ 0.6
CBX8Q9HC52 AC090616.6-201ENST00000582640 721 ntBASIC18.83■□□□□ 0.6
CBX8Q9HC52 AC005363.2-201ENST00000618631 242 ntBASIC18.83■□□□□ 0.6
CBX8Q9HC52 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CBX8Q9HC52 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX8Q9HC52 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CBX8Q9HC52 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.83■□□□□ 0.6
CBX8Q9HC52 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX8Q9HC52 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX8Q9HC52 AL671710.1-201ENST00000610245 2349 ntBASIC18.83■□□□□ 0.6
CBX8Q9HC52 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CBX8Q9HC52 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.82■□□□□ 0.6
CBX8Q9HC52 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.82■□□□□ 0.6
CBX8Q9HC52 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.82■□□□□ 0.6
CBX8Q9HC52 AC004817.3-201ENST00000602957 2129 ntBASIC18.82■□□□□ 0.6
CBX8Q9HC52 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CBX8Q9HC52 PMPCAP1-201ENST00000508114 1576 ntBASIC18.82■□□□□ 0.6
CBX8Q9HC52 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 TSPY26P-202ENST00000565928 3884 ntBASIC18.82■□□□□ 0.6
CBX8Q9HC52 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CBX8Q9HC52 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.82■□□□□ 0.6
CBX8Q9HC52 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.82■□□□□ 0.6
CBX8Q9HC52 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.82■□□□□ 0.6
CBX8Q9HC52 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.82■□□□□ 0.6
CBX8Q9HC52 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
CBX8Q9HC52 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.82■□□□□ 0.6
CBX8Q9HC52 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 AP005901.3-202ENST00000581653 237 ntBASIC18.82■□□□□ 0.6
CBX8Q9HC52 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.82■□□□□ 0.6
CBX8Q9HC52 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 SNX33P1-201ENST00000592116 1762 ntBASIC18.82■□□□□ 0.6
CBX8Q9HC52 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.82■□□□□ 0.6
CBX8Q9HC52 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX8Q9HC52 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 AC246785.2-201ENST00000432512 513 ntBASIC18.81■□□□□ 0.6
CBX8Q9HC52 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 AC133561.5-201ENST00000635547 218 ntBASIC18.81■□□□□ 0.6
CBX8Q9HC52 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX8Q9HC52 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.81■□□□□ 0.6
CBX8Q9HC52 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms