Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 SIGLEC29P-201ENST00000599873 1114 ntBASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 CASP2-203ENST00000392925 616 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 PEBP1P2-201ENST00000603980 558 ntBASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 AL031598.1-201ENST00000561511 1773 ntBASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNE2Q8WXH0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 ACTG1P2-201ENST00000415776 1125 ntBASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 ACTG1P11-201ENST00000425411 1125 ntBASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 FOS-204ENST00000554617 796 ntTSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 DUT-207ENST00000559416 635 ntTSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 AC138894.2-201ENST00000602838 371 ntBASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 AL353770.1-201ENST00000614915 403 ntBASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 MIR6858-201ENST00000620733 67 ntBASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 AC022748.3-201ENST00000621828 275 ntBASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SYNE2Q8WXH0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
SYNE2Q8WXH0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SYNE2Q8WXH0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SYNE2Q8WXH0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SYNE2Q8WXH0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC6.65□□□□□ -1.35
SYNE2Q8WXH0 POU5F1P6-201ENST00000466990 990 ntBASIC6.65□□□□□ -1.35
SYNE2Q8WXH0 TMA16-204ENST00000508268 608 ntTSL 2 BASIC6.65□□□□□ -1.35
SYNE2Q8WXH0 AC022217.1-201ENST00000521069 738 ntBASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms