Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AL049840.3-201ENST00000602669 611 ntBASIC17.33■□□□□ 0.36
SCG3Q8WXD2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SCG3Q8WXD2 LINC02012-201ENST00000608206 1725 ntBASIC17.33■□□□□ 0.36
SCG3Q8WXD2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 SLC25A1P3-201ENST00000395415 828 ntBASIC17.32■□□□□ 0.36
SCG3Q8WXD2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 AC093525.9-201ENST00000624961 1746 ntBASIC17.32■□□□□ 0.36
SCG3Q8WXD2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SCG3Q8WXD2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.31■□□□□ 0.36
SCG3Q8WXD2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 STK19B-204ENST00000512515 211 ntBASIC17.31■□□□□ 0.36
SCG3Q8WXD2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 AC008735.5-201ENST00000623544 497 ntBASIC17.31■□□□□ 0.36
SCG3Q8WXD2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.31■□□□□ 0.36
SCG3Q8WXD2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 PMS2P7-201ENST00000506558 1336 ntBASIC17.3■□□□□ 0.36
SCG3Q8WXD2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SCG3Q8WXD2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms