Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGB4Q8WW32 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGB4Q8WW32 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.83■□□□□ 0.29
HMGB4Q8WW32 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
HMGB4Q8WW32 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMGB4Q8WW32 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 AC092580.3-201ENST00000430932 139 ntBASIC16.83■□□□□ 0.28
HMGB4Q8WW32 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 PCDHB18P-201ENST00000524813 2368 ntBASIC16.83■□□□□ 0.28
HMGB4Q8WW32 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 AL021920.2-201ENST00000624828 1351 ntBASIC16.83■□□□□ 0.28
HMGB4Q8WW32 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGB4Q8WW32 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 AC016396.2-201ENST00000562575 1417 ntBASIC16.82■□□□□ 0.28
HMGB4Q8WW32 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 AC063926.2-201ENST00000623766 1308 ntBASIC16.82■□□□□ 0.28
HMGB4Q8WW32 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 AC005225.4-201ENST00000557330 545 ntBASIC16.82■□□□□ 0.28
HMGB4Q8WW32 CYP2A7P1-201ENST00000595391 815 ntBASIC16.82■□□□□ 0.28
HMGB4Q8WW32 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.82■□□□□ 0.28
HMGB4Q8WW32 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGB4Q8WW32 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 KRT8P49-201ENST00000604166 1432 ntBASIC16.81■□□□□ 0.28
HMGB4Q8WW32 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 SLC25A1P3-201ENST00000395415 828 ntBASIC16.81■□□□□ 0.28
HMGB4Q8WW32 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 AC003101.2-201ENST00000612557 442 ntBASIC16.81■□□□□ 0.28
HMGB4Q8WW32 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 LINC00896-202ENST00000609602 2128 ntBASIC16.81■□□□□ 0.28
HMGB4Q8WW32 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGB4Q8WW32 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGB4Q8WW32 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HMGB4Q8WW32 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms