Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL9Q8NET4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTL9Q8NET4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.6■□□□□ 0.89
RTL9Q8NET4 KRT8P39-201ENST00000396270 1433 ntBASIC20.6■□□□□ 0.89
RTL9Q8NET4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.6■□□□□ 0.89
RTL9Q8NET4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTL9Q8NET4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.6■□□□□ 0.89
RTL9Q8NET4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL9Q8NET4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTL9Q8NET4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTL9Q8NET4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RTL9Q8NET4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.59■□□□□ 0.89
RTL9Q8NET4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 AC092580.3-201ENST00000430932 139 ntBASIC20.59■□□□□ 0.89
RTL9Q8NET4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.59■□□□□ 0.89
RTL9Q8NET4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RTL9Q8NET4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 AC005225.4-201ENST00000557330 545 ntBASIC20.59■□□□□ 0.89
RTL9Q8NET4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RTL9Q8NET4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
RTL9Q8NET4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.59■□□□□ 0.89
RTL9Q8NET4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 AL671710.1-201ENST00000610245 2349 ntBASIC20.59■□□□□ 0.89
RTL9Q8NET4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.59■□□□□ 0.89
RTL9Q8NET4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.59■□□□□ 0.89
RTL9Q8NET4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.59■□□□□ 0.89
RTL9Q8NET4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.59■□□□□ 0.89
RTL9Q8NET4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTL9Q8NET4 AC069120.2-201ENST00000524091 540 ntBASIC20.59■□□□□ 0.89
RTL9Q8NET4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.59■□□□□ 0.89
RTL9Q8NET4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.59■□□□□ 0.89
RTL9Q8NET4 AC007967.4-201ENST00000614700 386 ntBASIC20.59■□□□□ 0.89
RTL9Q8NET4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTL9Q8NET4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTL9Q8NET4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTL9Q8NET4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RTL9Q8NET4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTL9Q8NET4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTL9Q8NET4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTL9Q8NET4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTL9Q8NET4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTL9Q8NET4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTL9Q8NET4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RTL9Q8NET4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
RTL9Q8NET4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
RTL9Q8NET4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTL9Q8NET4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTL9Q8NET4 FAM220BP-201ENST00000377689 816 ntBASIC20.58■□□□□ 0.88
RTL9Q8NET4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
RTL9Q8NET4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.58■□□□□ 0.88
RTL9Q8NET4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RTL9Q8NET4 HLA-J-202ENST00000469281 1241 ntBASIC20.58■□□□□ 0.88
RTL9Q8NET4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.58■□□□□ 0.88
RTL9Q8NET4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.58■□□□□ 0.88
RTL9Q8NET4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.58■□□□□ 0.88
RTL9Q8NET4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.58■□□□□ 0.88
RTL9Q8NET4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.58■□□□□ 0.88
RTL9Q8NET4 AP3S2-216ENST00000617003 1561 ntBASIC20.58■□□□□ 0.88
RTL9Q8NET4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.58■□□□□ 0.88
RTL9Q8NET4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.57■□□□□ 0.88
RTL9Q8NET4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RTL9Q8NET4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RTL9Q8NET4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
RTL9Q8NET4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RTL9Q8NET4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
RTL9Q8NET4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.57■□□□□ 0.88
RTL9Q8NET4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RTL9Q8NET4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
RTL9Q8NET4 AC073439.1-201ENST00000624121 1774 ntBASIC20.57■□□□□ 0.88
RTL9Q8NET4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.57■□□□□ 0.88
RTL9Q8NET4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.57■□□□□ 0.88
RTL9Q8NET4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.57■□□□□ 0.88
RTL9Q8NET4 FAM207CP-201ENST00000443486 507 ntBASIC20.57■□□□□ 0.88
RTL9Q8NET4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTL9Q8NET4 MIR4453-201ENST00000584019 89 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms