Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 AL513480.1-201ENST00000451731 511 ntBASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 AC005412.3-201ENST00000580309 715 ntBASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PCDH20Q8N6Y1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDH20Q8N6Y1 AC008894.3-201ENST00000624324 3103 ntBASIC17.21■□□□□ 0.34
PCDH20Q8N6Y1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDH20Q8N6Y1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 UPF3AP3-201ENST00000420996 769 ntBASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 DUX4L17-201ENST00000557360 1267 ntBASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 MIR3687-2-201ENST00000577708 61 ntBASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 MIR3687-1-201ENST00000614492 61 ntBASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PCDH20Q8N6Y1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 TOP3BP1-201ENST00000420768 1380 ntBASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 AL021920.2-201ENST00000624828 1351 ntBASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 GPX1P2-201ENST00000429271 606 ntBASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH20Q8N6Y1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.18■□□□□ 0.34
PCDH20Q8N6Y1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms