Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 AC098831.1-202ENST00000438821 336 ntBASIC11.23□□□□□ -0.61
SCXQ7RTU7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 AC008735.5-201ENST00000623544 497 ntBASIC11.23□□□□□ -0.61
SCXQ7RTU7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 AP000867.4-201ENST00000641616 219 ntBASIC11.23□□□□□ -0.61
SCXQ7RTU7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 AC097374.2-201ENST00000618617 1306 ntBASIC11.23□□□□□ -0.61
SCXQ7RTU7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC11.23□□□□□ -0.61
SCXQ7RTU7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCXQ7RTU7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 MIR1233-2-201ENST00000408138 82 ntBASIC11.22□□□□□ -0.61
SCXQ7RTU7 MIR1233-1-201ENST00000408722 82 ntBASIC11.22□□□□□ -0.61
SCXQ7RTU7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 BX842568.4-201ENST00000421222 227 ntBASIC11.22□□□□□ -0.61
SCXQ7RTU7 MED15P5-201ENST00000423150 992 ntBASIC11.22□□□□□ -0.61
SCXQ7RTU7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 BX005266.1-201ENST00000473402 457 ntBASIC11.22□□□□□ -0.61
SCXQ7RTU7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 AC010460.3-201ENST00000511359 1579 ntBASIC11.22□□□□□ -0.61
SCXQ7RTU7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 IGHV3-22-201ENST00000520721 359 ntBASIC11.22□□□□□ -0.61
SCXQ7RTU7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCXQ7RTU7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 AC079328.2-201ENST00000561241 3354 ntBASIC11.22□□□□□ -0.61
SCXQ7RTU7 AC012640.2-201ENST00000561606 901 ntBASIC11.22□□□□□ -0.61
SCXQ7RTU7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SCXQ7RTU7 KRT8P47-201ENST00000604727 1398 ntBASIC11.22□□□□□ -0.61
SCXQ7RTU7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms