Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ABCA4P78363 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
ABCA4P78363 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.46□□□□□ -0.09
ABCA4P78363 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 MRPS18AP1-201ENST00000414458 589 ntBASIC14.46□□□□□ -0.09
ABCA4P78363 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.46□□□□□ -0.09
ABCA4P78363 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ABCA4P78363 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ABCA4P78363 SPDYE22P-201ENST00000582158 798 ntBASIC14.46□□□□□ -0.09
ABCA4P78363 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.46□□□□□ -0.09
ABCA4P78363 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ABCA4P78363 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA4P78363 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCA4P78363 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
ABCA4P78363 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.46□□□□□ -0.1
ABCA4P78363 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.46□□□□□ -0.1
ABCA4P78363 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ABCA4P78363 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.46□□□□□ -0.1
ABCA4P78363 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
ABCA4P78363 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ABCA4P78363 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
ABCA4P78363 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ABCA4P78363 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
ABCA4P78363 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCA4P78363 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.45□□□□□ -0.1
ABCA4P78363 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.45□□□□□ -0.1
ABCA4P78363 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.45□□□□□ -0.1
ABCA4P78363 AL138918.1-201ENST00000568306 659 ntBASIC14.45□□□□□ -0.1
ABCA4P78363 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.45□□□□□ -0.1
ABCA4P78363 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCA4P78363 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 CU639417.3-201ENST00000624240 1404 ntBASIC14.45□□□□□ -0.1
ABCA4P78363 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.45□□□□□ -0.1
ABCA4P78363 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ABCA4P78363 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ABCA4P78363 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.45□□□□□ -0.1
ABCA4P78363 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.45□□□□□ -0.1
ABCA4P78363 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ABCA4P78363 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ABCA4P78363 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCA4P78363 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA4P78363 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ABCA4P78363 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ABCA4P78363 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ABCA4P78363 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.44□□□□□ -0.1
ABCA4P78363 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.44□□□□□ -0.1
ABCA4P78363 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.44□□□□□ -0.1
ABCA4P78363 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.44□□□□□ -0.1
ABCA4P78363 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.44□□□□□ -0.1
ABCA4P78363 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.44□□□□□ -0.1
ABCA4P78363 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ABCA4P78363 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ABCA4P78363 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ABCA4P78363 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 ARSEP1-201ENST00000420443 635 ntBASIC14.44□□□□□ -0.1
ABCA4P78363 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCA4P78363 SERBP1P5-201ENST00000510079 1181 ntBASIC14.44□□□□□ -0.1
ABCA4P78363 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCA4P78363 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.44□□□□□ -0.1
ABCA4P78363 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 AC100757.3-201ENST00000622361 1406 ntBASIC14.44□□□□□ -0.1
ABCA4P78363 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCA4P78363 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ABCA4P78363 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCA4P78363 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ABCA4P78363 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms