Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AC211476.1-201ENST00000503899 468 ntBASIC16.82■□□□□ 0.28
CSNK1DP48730 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CSNK1DP48730 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1DP48730 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.82■□□□□ 0.28
CSNK1DP48730 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1DP48730 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.82■□□□□ 0.28
CSNK1DP48730 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.82■□□□□ 0.28
CSNK1DP48730 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
CSNK1DP48730 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CSNK1DP48730 AC026120.1-201ENST00000611536 926 ntBASIC16.82■□□□□ 0.28
CSNK1DP48730 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 AC006538.3-201ENST00000612495 578 ntBASIC16.82■□□□□ 0.28
CSNK1DP48730 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CSNK1DP48730 AC022211.2-201ENST00000585075 2527 ntBASIC16.82■□□□□ 0.28
CSNK1DP48730 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CSNK1DP48730 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1DP48730 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1DP48730 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CSNK1DP48730 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1DP48730 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.82■□□□□ 0.28
CSNK1DP48730 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1DP48730 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1DP48730 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CSNK1DP48730 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CSNK1DP48730 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1DP48730 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CSNK1DP48730 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 TFAMP1-201ENST00000412727 736 ntBASIC16.81■□□□□ 0.28
CSNK1DP48730 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1DP48730 RN7SL589P-201ENST00000481268 310 ntBASIC16.81■□□□□ 0.28
CSNK1DP48730 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
CSNK1DP48730 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1DP48730 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1DP48730 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1DP48730 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.81■□□□□ 0.28
CSNK1DP48730 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1DP48730 AC139530.3-201ENST00000620344 690 ntBASIC16.81■□□□□ 0.28
CSNK1DP48730 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1DP48730 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1DP48730 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1DP48730 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1DP48730 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CSNK1DP48730 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CSNK1DP48730 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
CSNK1DP48730 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1DP48730 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CSNK1DP48730 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.8■□□□□ 0.28
CSNK1DP48730 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 RNF216P1-203ENST00000404404 2427 ntBASIC16.8■□□□□ 0.28
CSNK1DP48730 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.8■□□□□ 0.28
CSNK1DP48730 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CSNK1DP48730 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
CSNK1DP48730 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1DP48730 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.8■□□□□ 0.28
CSNK1DP48730 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 AC004967.1-201ENST00000453589 447 ntBASIC16.8■□□□□ 0.28
CSNK1DP48730 KRT18P34-201ENST00000488218 1270 ntBASIC16.8■□□□□ 0.28
CSNK1DP48730 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.8■□□□□ 0.28
CSNK1DP48730 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.8■□□□□ 0.28
CSNK1DP48730 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.8■□□□□ 0.28
CSNK1DP48730 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1DP48730 AC020765.3-201ENST00000613051 740 ntBASIC16.8■□□□□ 0.28
CSNK1DP48730 AC105339.1-204ENST00000636249 355 ntBASIC16.8■□□□□ 0.28
CSNK1DP48730 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1DP48730 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1DP48730 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms