Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.92■□□□□ 0.62
TM4SF4P48230 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF4P48230 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF4P48230 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF4P48230 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF4P48230 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.92■□□□□ 0.62
TM4SF4P48230 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF4P48230 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.92■□□□□ 0.62
TM4SF4P48230 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF4P48230 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TM4SF4P48230 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 AC016396.2-201ENST00000562575 1417 ntBASIC18.91■□□□□ 0.62
TM4SF4P48230 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.91■□□□□ 0.62
TM4SF4P48230 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
TM4SF4P48230 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.91■□□□□ 0.62
TM4SF4P48230 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.91■□□□□ 0.62
TM4SF4P48230 AC099548.2-209ENST00000480264 625 ntBASIC18.91■□□□□ 0.62
TM4SF4P48230 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.91■□□□□ 0.62
TM4SF4P48230 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.91■□□□□ 0.62
TM4SF4P48230 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.91■□□□□ 0.62
TM4SF4P48230 MIR3615-201ENST00000581999 87 ntBASIC18.91■□□□□ 0.62
TM4SF4P48230 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.91■□□□□ 0.62
TM4SF4P48230 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.91■□□□□ 0.62
TM4SF4P48230 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.91■□□□□ 0.62
TM4SF4P48230 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.91■□□□□ 0.62
TM4SF4P48230 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TM4SF4P48230 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF4P48230 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TM4SF4P48230 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TM4SF4P48230 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.9■□□□□ 0.62
TM4SF4P48230 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.9■□□□□ 0.62
TM4SF4P48230 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TM4SF4P48230 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.9■□□□□ 0.62
TM4SF4P48230 FAM21FP-201ENST00000426241 1131 ntBASIC18.9■□□□□ 0.62
TM4SF4P48230 ACTG1P3-201ENST00000431775 1114 ntBASIC18.9■□□□□ 0.62
TM4SF4P48230 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.9■□□□□ 0.62
TM4SF4P48230 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.9■□□□□ 0.62
TM4SF4P48230 PFN1P12-201ENST00000455938 534 ntBASIC18.9■□□□□ 0.62
TM4SF4P48230 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.9■□□□□ 0.62
TM4SF4P48230 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TM4SF4P48230 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
TM4SF4P48230 AC074044.1-201ENST00000609673 707 ntBASIC18.9■□□□□ 0.62
TM4SF4P48230 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.9■□□□□ 0.62
TM4SF4P48230 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TM4SF4P48230 AC120498.9-201ENST00000339021 3867 ntBASIC18.9■□□□□ 0.62
TM4SF4P48230 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 AL355312.1-201ENST00000407115 2176 ntBASIC18.9■□□□□ 0.62
TM4SF4P48230 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TM4SF4P48230 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.9■□□□□ 0.62
TM4SF4P48230 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.9■□□□□ 0.62
TM4SF4P48230 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TM4SF4P48230 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF4P48230 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.89■□□□□ 0.61
TM4SF4P48230 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.89■□□□□ 0.61
TM4SF4P48230 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF4P48230 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF4P48230 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF4P48230 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF4P48230 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF4P48230 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF4P48230 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TM4SF4P48230 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF4P48230 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.89■□□□□ 0.61
TM4SF4P48230 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.89■□□□□ 0.61
TM4SF4P48230 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.89■□□□□ 0.61
TM4SF4P48230 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.89■□□□□ 0.61
TM4SF4P48230 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.89■□□□□ 0.61
TM4SF4P48230 AL022328.1-201ENST00000610050 478 ntBASIC18.89■□□□□ 0.61
TM4SF4P48230 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TM4SF4P48230 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF4P48230 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF4P48230 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms