Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN6P29350 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN6P29350 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN6P29350 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PTPN6P29350 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PTPN6P29350 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
PTPN6P29350 AL590787.1-201ENST00000568856 1315 ntBASIC16■□□□□ 0.15
PTPN6P29350 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16■□□□□ 0.15
PTPN6P29350 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PTPN6P29350 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16■□□□□ 0.15
PTPN6P29350 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16■□□□□ 0.15
PTPN6P29350 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16■□□□□ 0.15
PTPN6P29350 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
PTPN6P29350 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16■□□□□ 0.15
PTPN6P29350 FAM197Y8-203ENST00000450145 560 ntBASIC16■□□□□ 0.15
PTPN6P29350 SCARNA2-201ENST00000458748 420 ntBASIC16■□□□□ 0.15
PTPN6P29350 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16■□□□□ 0.15
PTPN6P29350 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16■□□□□ 0.15
PTPN6P29350 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16■□□□□ 0.15
PTPN6P29350 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PTPN6P29350 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
PTPN6P29350 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16■□□□□ 0.15
PTPN6P29350 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16■□□□□ 0.15
PTPN6P29350 SLC25A6P4-201ENST00000586535 553 ntBASIC16■□□□□ 0.15
PTPN6P29350 AC013467.2-201ENST00000605472 835 ntBASIC16■□□□□ 0.15
PTPN6P29350 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16■□□□□ 0.15
PTPN6P29350 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16■□□□□ 0.15
PTPN6P29350 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PTPN6P29350 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 AL162727.3-201ENST00000635661 2787 ntBASIC16■□□□□ 0.15
PTPN6P29350 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 KRT8P49-201ENST00000604166 1432 ntBASIC16■□□□□ 0.15
PTPN6P29350 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PTPN6P29350 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PTPN6P29350 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN6P29350 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN6P29350 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
PTPN6P29350 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.99■□□□□ 0.15
PTPN6P29350 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PTPN6P29350 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 AC007950.2-201ENST00000615045 2347 ntBASIC15.99■□□□□ 0.15
PTPN6P29350 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 AC005052.1-201ENST00000625181 2492 ntBASIC15.99■□□□□ 0.15
PTPN6P29350 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PTPN6P29350 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN6P29350 MRPL3P1-201ENST00000400109 1033 ntBASIC15.99■□□□□ 0.15
PTPN6P29350 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.99■□□□□ 0.15
PTPN6P29350 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN6P29350 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.99■□□□□ 0.15
PTPN6P29350 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 SART3-203ENST00000546611 1184 ntBASIC15.99■□□□□ 0.15
PTPN6P29350 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
PTPN6P29350 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.99■□□□□ 0.15
PTPN6P29350 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.99■□□□□ 0.15
PTPN6P29350 AL139288.1-201ENST00000623748 933 ntBASIC15.99■□□□□ 0.15
PTPN6P29350 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PTPN6P29350 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN6P29350 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 AL356309.3-201ENST00000624132 1934 ntBASIC15.99■□□□□ 0.15
PTPN6P29350 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.99■□□□□ 0.15
PTPN6P29350 MTHFR-217ENST00000641820 1569 ntBASIC15.99■□□□□ 0.15
PTPN6P29350 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN6P29350 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN6P29350 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PTPN6P29350 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 AL021920.2-201ENST00000624828 1351 ntBASIC15.99■□□□□ 0.15
PTPN6P29350 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
PTPN6P29350 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.99■□□□□ 0.15
PTPN6P29350 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTPN6P29350 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms