Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LMO1P25800 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 HLA-A-202ENST00000376806 1854 ntBASIC14.16□□□□□ -0.14
LMO1P25800 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO1P25800 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.16□□□□□ -0.14
LMO1P25800 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.16□□□□□ -0.14
LMO1P25800 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO1P25800 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO1P25800 PI4KAP1-204ENST00000612579 1703 ntBASIC14.16□□□□□ -0.14
LMO1P25800 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LMO1P25800 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.16□□□□□ -0.14
LMO1P25800 AC073621.1-201ENST00000392730 636 ntBASIC14.16□□□□□ -0.14
LMO1P25800 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LMO1P25800 AC087163.2-201ENST00000457299 853 ntBASIC14.16□□□□□ -0.14
LMO1P25800 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO1P25800 AC073648.2-201ENST00000510116 352 ntBASIC14.16□□□□□ -0.14
LMO1P25800 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.16□□□□□ -0.14
LMO1P25800 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO1P25800 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.16□□□□□ -0.14
LMO1P25800 GGTLC5P-201ENST00000617623 998 ntBASIC14.16□□□□□ -0.14
LMO1P25800 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.16□□□□□ -0.14
LMO1P25800 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO1P25800 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LMO1P25800 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 AC006538.1-201ENST00000567905 1585 ntBASIC14.16□□□□□ -0.14
LMO1P25800 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.16□□□□□ -0.14
LMO1P25800 AC068418.2-201ENST00000577309 3703 ntBASIC14.16□□□□□ -0.14
LMO1P25800 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO1P25800 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 AC005052.1-201ENST00000625181 2492 ntBASIC14.16□□□□□ -0.14
LMO1P25800 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.16□□□□□ -0.14
LMO1P25800 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO1P25800 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.16□□□□□ -0.14
LMO1P25800 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO1P25800 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO1P25800 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO1P25800 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO1P25800 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO1P25800 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO1P25800 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LMO1P25800 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LMO1P25800 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO1P25800 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LMO1P25800 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.15□□□□□ -0.14
LMO1P25800 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
LMO1P25800 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO1P25800 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.15□□□□□ -0.14
LMO1P25800 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LMO1P25800 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO1P25800 AC002310.6-201ENST00000624451 1377 ntBASIC14.15□□□□□ -0.14
LMO1P25800 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO1P25800 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.15□□□□□ -0.14
LMO1P25800 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.15□□□□□ -0.14
LMO1P25800 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.15□□□□□ -0.14
LMO1P25800 RNPS1P1-201ENST00000507437 918 ntBASIC14.15□□□□□ -0.14
LMO1P25800 OR7E14P-202ENST00000530490 1290 ntBASIC14.15□□□□□ -0.14
LMO1P25800 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.15□□□□□ -0.14
LMO1P25800 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.15□□□□□ -0.14
LMO1P25800 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO1P25800 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.15□□□□□ -0.14
LMO1P25800 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LMO1P25800 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO1P25800 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LMO1P25800 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LMO1P25800 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO1P25800 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.15□□□□□ -0.14
LMO1P25800 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LMO1P25800 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.15□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms