Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
XPAP23025 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
XPAP23025 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
XPAP23025 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
XPAP23025 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.99■□□□□ 0.31
XPAP23025 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
XPAP23025 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
XPAP23025 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.99■□□□□ 0.31
XPAP23025 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.99■□□□□ 0.31
XPAP23025 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.99■□□□□ 0.31
XPAP23025 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.99■□□□□ 0.31
XPAP23025 AL031432.2-201ENST00000566714 459 ntBASIC16.99■□□□□ 0.31
XPAP23025 AC005829.1-201ENST00000570002 483 ntBASIC16.99■□□□□ 0.31
XPAP23025 AL928711.1-201ENST00000570165 459 ntBASIC16.99■□□□□ 0.31
XPAP23025 MIR4515-201ENST00000584082 81 ntBASIC16.99■□□□□ 0.31
XPAP23025 AC068137.2-201ENST00000605408 478 ntBASIC16.99■□□□□ 0.31
XPAP23025 AC006538.3-201ENST00000612495 578 ntBASIC16.99■□□□□ 0.31
XPAP23025 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.99■□□□□ 0.31
XPAP23025 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.99■□□□□ 0.31
XPAP23025 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
XPAP23025 AC012569.1-201ENST00000591191 1524 ntBASIC16.99■□□□□ 0.31
XPAP23025 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
XPAP23025 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.99■□□□□ 0.31
XPAP23025 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
XPAP23025 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
XPAP23025 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.99■□□□□ 0.31
XPAP23025 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
XPAP23025 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
XPAP23025 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
XPAP23025 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
XPAP23025 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.98■□□□□ 0.31
XPAP23025 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
XPAP23025 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.98■□□□□ 0.31
XPAP23025 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
XPAP23025 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
XPAP23025 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
XPAP23025 RPSAP43-201ENST00000402237 625 ntBASIC16.98■□□□□ 0.31
XPAP23025 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.98■□□□□ 0.31
XPAP23025 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.98■□□□□ 0.31
XPAP23025 AC112482.1-201ENST00000492080 688 ntBASIC16.98■□□□□ 0.31
XPAP23025 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.98■□□□□ 0.31
XPAP23025 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
XPAP23025 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.98■□□□□ 0.31
XPAP23025 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.98■□□□□ 0.31
XPAP23025 AC091167.2-201ENST00000579581 588 ntBASIC16.98■□□□□ 0.31
XPAP23025 AL078644.1-201ENST00000609881 752 ntBASIC16.98■□□□□ 0.31
XPAP23025 C20orf181-201ENST00000623918 480 ntBASIC16.98■□□□□ 0.31
XPAP23025 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.98■□□□□ 0.31
XPAP23025 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
XPAP23025 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
XPAP23025 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.98■□□□□ 0.31
XPAP23025 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
XPAP23025 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.98■□□□□ 0.31
XPAP23025 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.98■□□□□ 0.31
XPAP23025 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.98■□□□□ 0.31
XPAP23025 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
XPAP23025 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.98■□□□□ 0.31
XPAP23025 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
XPAP23025 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.97■□□□□ 0.31
XPAP23025 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
XPAP23025 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
XPAP23025 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.97■□□□□ 0.31
XPAP23025 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
XPAP23025 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
XPAP23025 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.97■□□□□ 0.31
XPAP23025 HCG4-201ENST00000418983 998 ntBASIC16.97■□□□□ 0.31
XPAP23025 FAM58CP-201ENST00000435741 640 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms