Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.37■□□□□ 0.05
P04436 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.37■□□□□ 0.05
P04436 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.37■□□□□ 0.05
P04436 CNN2P11-201ENST00000429351 262 ntBASIC15.37■□□□□ 0.05
P04436 AL671277.1-201ENST00000429656 993 ntBASIC15.37■□□□□ 0.05
P04436 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
P04436 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
P04436 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
P04436 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.37■□□□□ 0.05
P04436 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
P04436 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.37■□□□□ 0.05
P04436 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.37■□□□□ 0.05
P04436 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
P04436 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.37■□□□□ 0.05
P04436 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
P04436 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
P04436 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
P04436 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
P04436 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.37■□□□□ 0.05
P04436 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
P04436 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
P04436 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
P04436 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
P04436 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.37■□□□□ 0.05
P04436 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
P04436 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
P04436 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.37■□□□□ 0.05
P04436 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
P04436 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.37■□□□□ 0.05
P04436 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
P04436 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
P04436 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
P04436 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.36■□□□□ 0.05
P04436 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
P04436 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
P04436 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
P04436 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
P04436 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
P04436 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.36■□□□□ 0.05
P04436 AC092183.1-201ENST00000469884 875 ntBASIC15.36■□□□□ 0.05
P04436 AP000344.2-201ENST00000512987 629 ntBASIC15.36■□□□□ 0.05
P04436 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.36■□□□□ 0.05
P04436 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.36■□□□□ 0.05
P04436 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.36■□□□□ 0.05
P04436 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.36■□□□□ 0.05
P04436 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
P04436 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
P04436 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.36■□□□□ 0.05
P04436 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.36■□□□□ 0.05
P04436 AL009183.1-201ENST00000603760 355 ntBASIC15.36■□□□□ 0.05
P04436 AL031055.1-201ENST00000606362 631 ntBASIC15.36■□□□□ 0.05
P04436 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.36■□□□□ 0.05
P04436 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.36■□□□□ 0.05
P04436 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
P04436 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
P04436 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
P04436 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
P04436 AC026471.1-201ENST00000564629 3026 ntBASIC15.36■□□□□ 0.05
P04436 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
P04436 AC108860.2-201ENST00000562760 2183 ntBASIC15.36■□□□□ 0.05
P04436 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
P04436 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
P04436 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
P04436 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
P04436 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.36■□□□□ 0.05
P04436 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.35■□□□□ 0.05
P04436 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
P04436 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
P04436 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
P04436 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.35■□□□□ 0.05
P04436 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
P04436 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.35■□□□□ 0.05
P04436 AC092068.3-201ENST00000587894 2016 ntBASIC15.35■□□□□ 0.05
P04436 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 PMS2P4-201ENST00000412466 1052 ntBASIC15.35■□□□□ 0.05
P04436 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.35■□□□□ 0.05
P04436 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.35■□□□□ 0.05
P04436 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.35■□□□□ 0.05
P04436 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.35■□□□□ 0.05
P04436 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.35■□□□□ 0.05
P04436 AP002490.2-201ENST00000524791 560 ntBASIC15.35■□□□□ 0.05
P04436 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
P04436 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.35■□□□□ 0.05
P04436 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.35■□□□□ 0.05
P04436 CYP2A7P1-201ENST00000595391 815 ntBASIC15.35■□□□□ 0.05
P04436 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
P04436 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
P04436 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms