Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.8□□□□□ -0.2
SSSCA1O60232 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SSSCA1O60232 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.8□□□□□ -0.2
SSSCA1O60232 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 FAM8A6P-201ENST00000407496 1135 ntBASIC13.8□□□□□ -0.2
SSSCA1O60232 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SSSCA1O60232 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.8□□□□□ -0.2
SSSCA1O60232 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.8□□□□□ -0.2
SSSCA1O60232 AL355075.4-201ENST00000554988 638 ntBASIC13.8□□□□□ -0.2
SSSCA1O60232 ZNF444P1-201ENST00000559497 298 ntBASIC13.8□□□□□ -0.2
SSSCA1O60232 AC104640.1-201ENST00000562617 2109 ntBASIC13.8□□□□□ -0.2
SSSCA1O60232 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SSSCA1O60232 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.8□□□□□ -0.2
SSSCA1O60232 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 AP002414.2-201ENST00000591780 3365 ntBASIC13.8□□□□□ -0.2
SSSCA1O60232 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.8□□□□□ -0.2
SSSCA1O60232 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SSSCA1O60232 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.8□□□□□ -0.2
SSSCA1O60232 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SSSCA1O60232 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.8□□□□□ -0.2
SSSCA1O60232 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SSSCA1O60232 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.79□□□□□ -0.2
SSSCA1O60232 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SSSCA1O60232 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SSSCA1O60232 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.79□□□□□ -0.2
SSSCA1O60232 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.79□□□□□ -0.2
SSSCA1O60232 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.79□□□□□ -0.2
SSSCA1O60232 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.79□□□□□ -0.2
SSSCA1O60232 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
SSSCA1O60232 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.79□□□□□ -0.2
SSSCA1O60232 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SSSCA1O60232 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SSSCA1O60232 HLA-F-220ENST00000434407 884 ntBASIC13.79□□□□□ -0.2
SSSCA1O60232 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 TSPY20P-201ENST00000450910 630 ntBASIC13.79□□□□□ -0.2
SSSCA1O60232 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.79□□□□□ -0.2
SSSCA1O60232 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.79□□□□□ -0.2
SSSCA1O60232 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.79□□□□□ -0.2
SSSCA1O60232 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.79□□□□□ -0.2
SSSCA1O60232 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.79□□□□□ -0.2
SSSCA1O60232 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 GPR32P1-201ENST00000601788 811 ntBASIC13.79□□□□□ -0.2
SSSCA1O60232 AL023973.1-201ENST00000624619 620 ntBASIC13.79□□□□□ -0.2
SSSCA1O60232 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.79□□□□□ -0.2
SSSCA1O60232 AC141257.4-201ENST00000634557 245 ntBASIC13.79□□□□□ -0.2
SSSCA1O60232 AC136944.6-201ENST00000634818 245 ntBASIC13.79□□□□□ -0.2
SSSCA1O60232 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SSSCA1O60232 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSSCA1O60232 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SSSCA1O60232 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SSSCA1O60232 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SSSCA1O60232 MIR718-201ENST00000390190 70 ntBASIC13.78□□□□□ -0.2
SSSCA1O60232 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms