Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPDC1A2A3K4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 HCG4B-203ENST00000450128 991 ntBASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPDC1A2A3K4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 PCDHB19P-201ENST00000570871 2371 ntBASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 PI4KAP1-204ENST00000612579 1703 ntBASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 MTDHP5-201ENST00000598980 586 ntBASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 AC010654.1-201ENST00000615722 808 ntBASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPDC1A2A3K4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 GGTLC5P-201ENST00000617623 998 ntBASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 AC092865.6-201ENST00000642101 219 ntBASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms