Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 C2orf69P1-201ENST00000563532 1093 ntBASIC6.75□□□□□ -1.33
MACF1Q9UPN3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 YRDCP1-201ENST00000621419 643 ntBASIC6.75□□□□□ -1.33
MACF1Q9UPN3 AL137077.2-201ENST00000635124 1608 ntBASIC6.75□□□□□ -1.33
MACF1Q9UPN3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 ENPP7P8-202ENST00000527856 1345 ntBASIC6.75□□□□□ -1.33
MACF1Q9UPN3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 HCG27-204ENST00000424675 895 ntTSL 3 BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC6.75□□□□□ -1.33
MACF1Q9UPN3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AL353770.1-201ENST00000614915 403 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AC141586.3-201ENST00000562166 1838 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AC004554.1-201ENST00000422830 1468 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AC098859.1-201ENST00000502915 1238 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 RARRES2P5-201ENST00000564013 466 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AC074044.1-201ENST00000609673 707 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 ESPNP-201ENST00000270691 2015 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AC073592.3-201ENST00000625118 1834 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AC006001.1-201ENST00000325130 474 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 RBPMSLP-201ENST00000433427 502 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 SCARNA21-201ENST00000517026 139 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 RN7SL399P-201ENST00000471648 279 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 IGHV3-37-201ENST00000518544 340 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AC078819.1-201ENST00000547454 765 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AC012085.1-201ENST00000548270 765 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 MIR3909-201ENST00000579518 119 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 GNRHR2-203ENST00000581100 1187 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 ACTG1P2-201ENST00000415776 1125 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 ACTG1P11-201ENST00000425411 1125 ntBASIC6.74□□□□□ -1.33
MACF1Q9UPN3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MACF1Q9UPN3 PSME2-217ENST00000615264 874 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms