Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 AC008677.1-201ENST00000519230 1561 ntBASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 BCRP1-201ENST00000444246 691 ntBASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 KLF2P3-201ENST00000451977 1087 ntBASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SPHK2Q9NRA0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 AL390955.2-201ENST00000603032 514 ntBASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SPHK2Q9NRA0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 AL671710.1-201ENST00000610245 2349 ntBASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 AC125807.1-201ENST00000483097 614 ntBASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK2Q9NRA0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK2Q9NRA0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SPHK2Q9NRA0 PCDHB17P-201ENST00000539533 2393 ntBASIC17.09■□□□□ 0.33
SPHK2Q9NRA0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK2Q9NRA0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.09■□□□□ 0.33
SPHK2Q9NRA0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SPHK2Q9NRA0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK2Q9NRA0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SPHK2Q9NRA0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.09■□□□□ 0.33
SPHK2Q9NRA0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK2Q9NRA0 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.09■□□□□ 0.33
SPHK2Q9NRA0 MIR943-201ENST00000401286 94 ntBASIC17.09■□□□□ 0.33
SPHK2Q9NRA0 AC107890.1-201ENST00000422478 521 ntBASIC17.09■□□□□ 0.33
SPHK2Q9NRA0 AC055876.3-201ENST00000431496 288 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms