Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC6A20Q9NP91 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A20Q9NP91 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC6A20Q9NP91 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
SLC6A20Q9NP91 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 AD000864.1-201ENST00000624076 2295 ntBASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 AC106886.4-201ENST00000623557 2502 ntBASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 HMGA1P7-201ENST00000406908 502 ntBASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 AC112482.1-201ENST00000492080 688 ntBASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 AC087641.1-201ENST00000557561 1021 ntBASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 PDPK2P-202ENST00000562415 1191 ntBASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 CYP2A7P1-201ENST00000595391 815 ntBASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 AC013467.2-201ENST00000605472 835 ntBASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
SLC6A20Q9NP91 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 AC092183.1-201ENST00000469884 875 ntBASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 AP002490.2-201ENST00000524791 560 ntBASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 AL645728.2-201ENST00000641974 660 ntBASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 PCDHA12-202ENST00000613593 2588 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms