Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC021097.1-201ENST00000607902 574 ntBASIC18.13■□□□□ 0.49
NXF3Q9H4D5 Z92544.3-201ENST00000624747 417 ntBASIC18.13■□□□□ 0.49
NXF3Q9H4D5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.13■□□□□ 0.49
NXF3Q9H4D5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.12■□□□□ 0.49
NXF3Q9H4D5 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.12■□□□□ 0.49
NXF3Q9H4D5 AC013467.2-201ENST00000605472 835 ntBASIC18.12■□□□□ 0.49
NXF3Q9H4D5 AC093512.1-201ENST00000617969 520 ntBASIC18.12■□□□□ 0.49
NXF3Q9H4D5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NXF3Q9H4D5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 RBPMS2P1-201ENST00000437762 623 ntBASIC18.11■□□□□ 0.49
NXF3Q9H4D5 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 SLC25A39P2-201ENST00000537614 270 ntBASIC18.11■□□□□ 0.49
NXF3Q9H4D5 KRT8P23-201ENST00000560090 1207 ntBASIC18.11■□□□□ 0.49
NXF3Q9H4D5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 AL138918.1-201ENST00000568306 659 ntBASIC18.11■□□□□ 0.49
NXF3Q9H4D5 AC027307.2-201ENST00000591252 911 ntBASIC18.11■□□□□ 0.49
NXF3Q9H4D5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 AC090340.1-201ENST00000620778 4980 ntBASIC18.11■□□□□ 0.49
NXF3Q9H4D5 SNX33P1-201ENST00000592116 1762 ntBASIC18.11■□□□□ 0.49
NXF3Q9H4D5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NXF3Q9H4D5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.1■□□□□ 0.49
NXF3Q9H4D5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms