Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTFDC1Q9BY42 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 AC068880.1-201ENST00000507289 2297 ntBASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 AC067852.2-201ENST00000590513 2313 ntBASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTFDC1Q9BY42 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
RTFDC1Q9BY42 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.27■□□□□ 0.83
RTFDC1Q9BY42 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.27■□□□□ 0.83
RTFDC1Q9BY42 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RTFDC1Q9BY42 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 MTND6P24-201ENST00000440466 518 ntBASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 AL079307.3-201ENST00000556114 283 ntBASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.26■□□□□ 0.83
RTFDC1Q9BY42 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 DFFBP1-201ENST00000433250 979 ntBASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTFDC1Q9BY42 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 GPR53P-205ENST00000457298 1084 ntBASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.24■□□□□ 0.83
RTFDC1Q9BY42 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms