Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 MIR1233-2-201ENST00000408138 82 ntBASIC16.71■□□□□ 0.27
SCAMP4Q969E2 MIR1233-1-201ENST00000408722 82 ntBASIC16.71■□□□□ 0.27
SCAMP4Q969E2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 HTR5BP-201ENST00000430851 1154 ntBASIC16.71■□□□□ 0.27
SCAMP4Q969E2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 AC005829.1-201ENST00000570002 483 ntBASIC16.71■□□□□ 0.27
SCAMP4Q969E2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 AL391256.1-201ENST00000443260 1855 ntBASIC16.71■□□□□ 0.27
SCAMP4Q969E2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.71■□□□□ 0.27
SCAMP4Q969E2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.26
SCAMP4Q969E2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
SCAMP4Q969E2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SCAMP4Q969E2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.26
SCAMP4Q969E2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SCAMP4Q969E2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 AC140658.5-201ENST00000438532 169 ntBASIC16.7■□□□□ 0.26
SCAMP4Q969E2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 AC006538.3-201ENST00000612495 578 ntBASIC16.7■□□□□ 0.26
SCAMP4Q969E2 AC139530.3-201ENST00000620344 690 ntBASIC16.7■□□□□ 0.26
SCAMP4Q969E2 AP001350.2-201ENST00000625104 1094 ntBASIC16.7■□□□□ 0.26
SCAMP4Q969E2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCAMP4Q969E2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.69■□□□□ 0.26
SCAMP4Q969E2 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms