Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD2Q8IV50 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 BX088651.1-201ENST00000540551 451 ntBASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 AL359736.2-201ENST00000621992 437 ntBASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 EGFEM1P-202ENST00000431685 1563 ntBASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 CICP14-201ENST00000629111 2732 ntBASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD2Q8IV50 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 NORAD-201ENST00000565493 5339 ntBASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.83□□□□□ -0.03
LYSMD2Q8IV50 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 AC113404.2-201ENST00000507884 177 ntBASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LYSMD2Q8IV50 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms