Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.52■□□□□ 0.24
LRRTM4Q86VH4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRTM4Q86VH4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM4Q86VH4 AC013467.2-201ENST00000605472 835 ntBASIC16.52■□□□□ 0.24
LRRTM4Q86VH4 GPALPP1-207ENST00000611650 899 ntBASIC16.52■□□□□ 0.24
LRRTM4Q86VH4 AC006538.3-201ENST00000612495 578 ntBASIC16.52■□□□□ 0.24
LRRTM4Q86VH4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM4Q86VH4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LRRTM4Q86VH4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRTM4Q86VH4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRTM4Q86VH4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
LRRTM4Q86VH4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LRRTM4Q86VH4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRTM4Q86VH4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRTM4Q86VH4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRTM4Q86VH4 AC006277.1-201ENST00000624348 1610 ntBASIC16.52■□□□□ 0.23
LRRTM4Q86VH4 LINC00895-201ENST00000629028 1637 ntBASIC16.52■□□□□ 0.23
LRRTM4Q86VH4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 ACTG1P14-201ENST00000446382 1122 ntBASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 AL031055.1-201ENST00000606362 631 ntBASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 AC139530.3-201ENST00000620344 690 ntBASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRRTM4Q86VH4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 RNU1-129P-201ENST00000384064 167 ntBASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 YBX1P5-201ENST00000509441 847 ntBASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 U1.21-201ENST00000580816 167 ntBASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 ELL2P1-201ENST00000413990 1906 ntBASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRRTM4Q86VH4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 AC211486.1-202ENST00000416371 468 ntBASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 CEND1P1-201ENST00000451006 455 ntBASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 AC211476.1-201ENST00000503899 468 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms