Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 AC013467.2-201ENST00000605472 835 ntBASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 AC021097.1-201ENST00000607902 574 ntBASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBE3BQ7Z3V4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 SNX33P1-201ENST00000592116 1762 ntBASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 LETM1P2-201ENST00000597330 2178 ntBASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 Z92544.3-201ENST00000624747 417 ntBASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBE3BQ7Z3V4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 AP001094.4-201ENST00000579008 2176 ntBASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 AC027307.2-201ENST00000591252 911 ntBASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 AC093512.1-201ENST00000617969 520 ntBASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 AC090340.1-201ENST00000620778 4980 ntBASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBE3BQ7Z3V4 AL645728.1-201ENST00000366221 2101 ntBASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 RBPMS2P1-201ENST00000437762 623 ntBASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 SLC25A39P2-201ENST00000537614 270 ntBASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 KRT8P23-201ENST00000560090 1207 ntBASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 AC008267.7-201ENST00000624570 1194 ntBASIC20.9■□□□□ 0.94
UBE3BQ7Z3V4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms