Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 MIR7706-201ENST00000613747 67 ntBASIC15.57■□□□□ 0.08
ZNF550Q7Z398 AC004706.3-202ENST00000621574 984 ntBASIC15.57■□□□□ 0.08
ZNF550Q7Z398 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 AL118508.1-201ENST00000613502 2345 ntBASIC15.57■□□□□ 0.08
ZNF550Q7Z398 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF550Q7Z398 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 HNRNPDP1-201ENST00000439535 754 ntBASIC15.56■□□□□ 0.08
ZNF550Q7Z398 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.56■□□□□ 0.08
ZNF550Q7Z398 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 AL391256.1-201ENST00000443260 1855 ntBASIC15.56■□□□□ 0.08
ZNF550Q7Z398 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 PCDHA14-201ENST00000506751 2298 ntBASIC15.56■□□□□ 0.08
ZNF550Q7Z398 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.56■□□□□ 0.08
ZNF550Q7Z398 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF550Q7Z398 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 LINC00895-201ENST00000629028 1637 ntBASIC15.55■□□□□ 0.08
ZNF550Q7Z398 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 LAGE3P1-201ENST00000425356 484 ntBASIC15.55■□□□□ 0.08
ZNF550Q7Z398 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 AC021087.4-201ENST00000563761 564 ntBASIC15.55■□□□□ 0.08
ZNF550Q7Z398 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 AC006557.2-201ENST00000592985 1240 ntBASIC15.55■□□□□ 0.08
ZNF550Q7Z398 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 FAM215A-202ENST00000632077 792 ntBASIC15.55■□□□□ 0.08
ZNF550Q7Z398 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ZNF550Q7Z398 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms