Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PER3P56645 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PER3P56645 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 AL020989.1-201ENST00000422979 469 ntBASIC15.68■□□□□ 0.1
PER3P56645 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
PER3P56645 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PER3P56645 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.68■□□□□ 0.1
PER3P56645 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PER3P56645 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PER3P56645 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.68■□□□□ 0.1
PER3P56645 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.68■□□□□ 0.1
PER3P56645 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.68■□□□□ 0.1
PER3P56645 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.68■□□□□ 0.1
PER3P56645 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.68■□□□□ 0.1
PER3P56645 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 AC068418.2-201ENST00000577309 3703 ntBASIC15.68■□□□□ 0.1
PER3P56645 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 NCF1C-201ENST00000438382 1427 ntBASIC15.68■□□□□ 0.1
PER3P56645 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PER3P56645 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.67■□□□□ 0.1
PER3P56645 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.67■□□□□ 0.1
PER3P56645 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.67■□□□□ 0.1
PER3P56645 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.67■□□□□ 0.1
PER3P56645 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PER3P56645 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PER3P56645 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.67■□□□□ 0.1
PER3P56645 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 AC138028.4-201ENST00000564984 1845 ntBASIC15.67■□□□□ 0.1
PER3P56645 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.67■□□□□ 0.1
PER3P56645 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.67■□□□□ 0.1
PER3P56645 AC108073.2-201ENST00000464002 357 ntBASIC15.67■□□□□ 0.1
PER3P56645 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.67■□□□□ 0.1
PER3P56645 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.67■□□□□ 0.1
PER3P56645 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 AC004706.3-202ENST00000621574 984 ntBASIC15.67■□□□□ 0.1
PER3P56645 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PER3P56645 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.67■□□□□ 0.1
PER3P56645 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
PER3P56645 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PER3P56645 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.67■□□□□ 0.1
PER3P56645 BX276092.7-203ENST00000637198 1536 ntBASIC15.67■□□□□ 0.1
PER3P56645 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
PER3P56645 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PER3P56645 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.67■□□□□ 0.1
PER3P56645 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.67■□□□□ 0.1
PER3P56645 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PER3P56645 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PER3P56645 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.66■□□□□ 0.1
PER3P56645 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.66■□□□□ 0.1
PER3P56645 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.66■□□□□ 0.1
PER3P56645 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PER3P56645 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
PER3P56645 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 TSEN15P1-201ENST00000423257 515 ntBASIC15.66■□□□□ 0.1
PER3P56645 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PER3P56645 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.66■□□□□ 0.1
PER3P56645 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 AP000344.2-201ENST00000512987 629 ntBASIC15.66■□□□□ 0.1
PER3P56645 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PER3P56645 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.66■□□□□ 0.1
PER3P56645 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.66■□□□□ 0.1
PER3P56645 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.66■□□□□ 0.1
PER3P56645 AD001527.2-201ENST00000622994 785 ntBASIC15.66■□□□□ 0.1
PER3P56645 AC092865.6-201ENST00000642101 219 ntBASIC15.66■□□□□ 0.1
PER3P56645 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
PER3P56645 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PER3P56645 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms