Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.62■□□□□ 0.25
LIMK1P53667 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.62■□□□□ 0.25
LIMK1P53667 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.62■□□□□ 0.25
LIMK1P53667 AC027369.6-201ENST00000525520 931 ntBASIC16.62■□□□□ 0.25
LIMK1P53667 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK1P53667 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.62■□□□□ 0.25
LIMK1P53667 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.62■□□□□ 0.25
LIMK1P53667 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK1P53667 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.62■□□□□ 0.25
LIMK1P53667 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK1P53667 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.62■□□□□ 0.25
LIMK1P53667 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK1P53667 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK1P53667 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK1P53667 AC100803.2-201ENST00000562459 1963 ntBASIC16.62■□□□□ 0.25
LIMK1P53667 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK1P53667 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.62■□□□□ 0.25
LIMK1P53667 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.62■□□□□ 0.25
LIMK1P53667 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIMK1P53667 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LIMK1P53667 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LIMK1P53667 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
LIMK1P53667 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.61■□□□□ 0.25
LIMK1P53667 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.61■□□□□ 0.25
LIMK1P53667 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LIMK1P53667 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LIMK1P53667 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LIMK1P53667 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.61■□□□□ 0.25
LIMK1P53667 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.61■□□□□ 0.25
LIMK1P53667 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.61■□□□□ 0.25
LIMK1P53667 AC107918.2-201ENST00000530817 355 ntBASIC16.61■□□□□ 0.25
LIMK1P53667 AC109635.5-201ENST00000533593 962 ntBASIC16.61■□□□□ 0.25
LIMK1P53667 HILS1-202ENST00000545329 423 ntBASIC16.61■□□□□ 0.25
LIMK1P53667 AL009183.1-201ENST00000603760 355 ntBASIC16.61■□□□□ 0.25
LIMK1P53667 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.61■□□□□ 0.25
LIMK1P53667 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.61■□□□□ 0.25
LIMK1P53667 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.61■□□□□ 0.25
LIMK1P53667 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.61■□□□□ 0.25
LIMK1P53667 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LIMK1P53667 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.61■□□□□ 0.25
LIMK1P53667 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LIMK1P53667 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK1P53667 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.6■□□□□ 0.25
LIMK1P53667 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LIMK1P53667 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.6■□□□□ 0.25
LIMK1P53667 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK1P53667 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK1P53667 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK1P53667 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
LIMK1P53667 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK1P53667 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.6■□□□□ 0.25
LIMK1P53667 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.6■□□□□ 0.25
LIMK1P53667 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.6■□□□□ 0.25
LIMK1P53667 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK1P53667 GIMAP3P-201ENST00000495150 836 ntBASIC16.6■□□□□ 0.25
LIMK1P53667 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.6■□□□□ 0.25
LIMK1P53667 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.6■□□□□ 0.25
LIMK1P53667 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.6■□□□□ 0.25
LIMK1P53667 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.6■□□□□ 0.25
LIMK1P53667 AC010336.2-201ENST00000564226 506 ntBASIC16.6■□□□□ 0.25
LIMK1P53667 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.6■□□□□ 0.25
LIMK1P53667 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.6■□□□□ 0.25
LIMK1P53667 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.6■□□□□ 0.25
LIMK1P53667 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.6■□□□□ 0.25
LIMK1P53667 AC084346.2-201ENST00000607097 949 ntBASIC16.6■□□□□ 0.25
LIMK1P53667 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK1P53667 AC008267.7-201ENST00000624570 1194 ntBASIC16.6■□□□□ 0.25
LIMK1P53667 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LIMK1P53667 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK1P53667 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.6■□□□□ 0.25
LIMK1P53667 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LIMK1P53667 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK1P53667 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.6■□□□□ 0.25
LIMK1P53667 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.6■□□□□ 0.25
LIMK1P53667 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK1P53667 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.6■□□□□ 0.25
LIMK1P53667 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LIMK1P53667 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIMK1P53667 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.59■□□□□ 0.25
LIMK1P53667 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIMK1P53667 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms