Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC061975.2-201ENST00000581722 295 ntBASIC18.95■□□□□ 0.62
TM4SF4P48230 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.95■□□□□ 0.62
TM4SF4P48230 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.95■□□□□ 0.62
TM4SF4P48230 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TM4SF4P48230 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 AC133963.1-201ENST00000504166 1679 ntBASIC18.95■□□□□ 0.62
TM4SF4P48230 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.94■□□□□ 0.62
TM4SF4P48230 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF4P48230 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF4P48230 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.94■□□□□ 0.62
TM4SF4P48230 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TM4SF4P48230 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF4P48230 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF4P48230 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF4P48230 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.94■□□□□ 0.62
TM4SF4P48230 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.94■□□□□ 0.62
TM4SF4P48230 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.94■□□□□ 0.62
TM4SF4P48230 GOLGA2P4-201ENST00000441462 777 ntBASIC18.94■□□□□ 0.62
TM4SF4P48230 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.94■□□□□ 0.62
TM4SF4P48230 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.94■□□□□ 0.62
TM4SF4P48230 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TM4SF4P48230 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.94■□□□□ 0.62
TM4SF4P48230 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TM4SF4P48230 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.94■□□□□ 0.62
TM4SF4P48230 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.94■□□□□ 0.62
TM4SF4P48230 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TM4SF4P48230 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF4P48230 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
TM4SF4P48230 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF4P48230 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF4P48230 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TM4SF4P48230 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF4P48230 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TM4SF4P48230 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TM4SF4P48230 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TM4SF4P48230 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TM4SF4P48230 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF4P48230 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.93■□□□□ 0.62
TM4SF4P48230 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TM4SF4P48230 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.93■□□□□ 0.62
TM4SF4P48230 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TM4SF4P48230 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.93■□□□□ 0.62
TM4SF4P48230 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TM4SF4P48230 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.93■□□□□ 0.62
TM4SF4P48230 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TM4SF4P48230 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TM4SF4P48230 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TM4SF4P48230 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 FO681548.1-201ENST00000455617 1132 ntBASIC18.93■□□□□ 0.62
TM4SF4P48230 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.93■□□□□ 0.62
TM4SF4P48230 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.93■□□□□ 0.62
TM4SF4P48230 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.93■□□□□ 0.62
TM4SF4P48230 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TM4SF4P48230 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.93■□□□□ 0.62
TM4SF4P48230 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.93■□□□□ 0.62
TM4SF4P48230 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.93■□□□□ 0.62
TM4SF4P48230 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.93■□□□□ 0.62
TM4SF4P48230 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TM4SF4P48230 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF4P48230 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.92■□□□□ 0.62
TM4SF4P48230 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF4P48230 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TM4SF4P48230 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF4P48230 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TM4SF4P48230 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF4P48230 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.92■□□□□ 0.62
TM4SF4P48230 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.92■□□□□ 0.62
TM4SF4P48230 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF4P48230 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.92■□□□□ 0.62
TM4SF4P48230 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF4P48230 TIMM17BP1-201ENST00000545713 516 ntBASIC18.92■□□□□ 0.62
TM4SF4P48230 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.92■□□□□ 0.62
TM4SF4P48230 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.92■□□□□ 0.62
TM4SF4P48230 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms