Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.59■□□□□ 0.89
PDE6BP35913 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PDE6BP35913 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.59■□□□□ 0.89
PDE6BP35913 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6BP35913 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.59■□□□□ 0.89
PDE6BP35913 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6BP35913 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6BP35913 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.59■□□□□ 0.89
PDE6BP35913 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDE6BP35913 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE6BP35913 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.59■□□□□ 0.89
PDE6BP35913 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6BP35913 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6BP35913 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6BP35913 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6BP35913 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6BP35913 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6BP35913 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
PDE6BP35913 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6BP35913 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6BP35913 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.58■□□□□ 0.89
PDE6BP35913 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PDE6BP35913 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.58■□□□□ 0.89
PDE6BP35913 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.58■□□□□ 0.89
PDE6BP35913 MIR1909-201ENST00000411312 80 ntBASIC20.58■□□□□ 0.89
PDE6BP35913 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.58■□□□□ 0.89
PDE6BP35913 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.58■□□□□ 0.89
PDE6BP35913 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6BP35913 RN7SL618P-201ENST00000477850 296 ntBASIC20.58■□□□□ 0.89
PDE6BP35913 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDE6BP35913 CHCHD2P3-201ENST00000603038 451 ntBASIC20.58■□□□□ 0.89
PDE6BP35913 AC008494.3-201ENST00000606615 944 ntBASIC20.58■□□□□ 0.89
PDE6BP35913 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.58■□□□□ 0.89
PDE6BP35913 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDE6BP35913 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.58■□□□□ 0.88
PDE6BP35913 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.58■□□□□ 0.88
PDE6BP35913 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDE6BP35913 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.58■□□□□ 0.88
PDE6BP35913 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE6BP35913 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6BP35913 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6BP35913 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6BP35913 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
PDE6BP35913 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.57■□□□□ 0.88
PDE6BP35913 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6BP35913 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6BP35913 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.57■□□□□ 0.88
PDE6BP35913 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.57■□□□□ 0.88
PDE6BP35913 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.57■□□□□ 0.88
PDE6BP35913 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6BP35913 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6BP35913 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6BP35913 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6BP35913 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6BP35913 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.57■□□□□ 0.88
PDE6BP35913 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
PDE6BP35913 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PDE6BP35913 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.56■□□□□ 0.88
PDE6BP35913 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE6BP35913 AC108860.2-201ENST00000562760 2183 ntBASIC20.56■□□□□ 0.88
PDE6BP35913 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PDE6BP35913 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PDE6BP35913 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PDE6BP35913 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PDE6BP35913 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.56■□□□□ 0.88
PDE6BP35913 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.56■□□□□ 0.88
PDE6BP35913 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.56■□□□□ 0.88
PDE6BP35913 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.56■□□□□ 0.88
PDE6BP35913 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PDE6BP35913 KRT17P8-201ENST00000540749 863 ntBASIC20.56■□□□□ 0.88
PDE6BP35913 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.56■□□□□ 0.88
PDE6BP35913 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PDE6BP35913 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PDE6BP35913 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PDE6BP35913 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE6BP35913 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE6BP35913 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
PDE6BP35913 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE6BP35913 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PDE6BP35913 AL023806.1-201ENST00000603994 1649 ntBASIC20.56■□□□□ 0.88
PDE6BP35913 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
PDE6BP35913 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.56■□□□□ 0.88
PDE6BP35913 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.56■□□□□ 0.88
PDE6BP35913 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.56■□□□□ 0.88
PDE6BP35913 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms